Comparative transcriptome analysis of male and female flowers in Spinacia oleracea L

ARGONAUTE5 Represses Age-Dependent Induction of Flowering Through Physical and Functional Interaction with miR156 in Arabidopsis

(2020) Charles Roussin-Léveillée et al.   PLANT AND CELL PHYSIOLOGY

The persimmon genome reveals clues to the evolution of a lineage-specific sex determination system in plants

(2020) Takashi Akagi et al.   PLoS Genetics

Pathways to sex determination in plants: how many roads lead to Rome?

(2020) Guanqiao Feng et al.   CURRENT OPINION IN PLANT BIOLOGY

Sex Determination by Two Y-linked Genes in Garden Asparagus

(2020) Alex Harkess et al.   PLANT CELL

Expression of the tomato WRKY gene, SlWRKY23, alters root sensitivity to ethylene, auxin and JA and affects aerial architecture in transgenic Arabidopsis

(2020) Deepika Singh et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

Construction of high-density genetic maps defined sex determination region of the Y chromosome in spinach

(2020) Li’ang Yu et al.   MOLECULAR GENETICS AND GENOMICS

Light Regulates Plant Alternative Splicing through the Control of Transcriptional Elongation

(2019) Micaela A. Godoy Herz et al.   MOLECULAR CELL

Molecular evidence for recent divergence of X- and Y-linked gene pairs in Spinacia oleracea L.

(2019) Yosuke Okazaki et al.   PLoS One

One Hundred Ways to Invent the Sexes: Theoretical and Observed Paths to Dioecy in Plants

(2018) Isabelle M. Henry et al.   Annual Review of Plant Biology

Does sexual dimorphism in plants promote sex chromosome evolution?

(2018) Deborah Charlesworth   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

The regulation of sporopollenin biosynthesis genes for rapid pollen wall formation

(2018) Ke Wang et al.   PLANT PHYSIOLOGY

Development of an X-specific marker and identification of YY individuals in spinach

(2018) William H. Wadlington et al.   THEORETICAL AND APPLIED GENETICS

UTR-Dependent Control of Gene Expression in Plants

(2018) Ashish Kumar Srivastava et al.   TRENDS IN PLANT SCIENCE

WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity

(2018) Tomáš Prát et al.   PLoS Genetics

Genus-wide sequencing supports a two-locus model for sex-determination in Phoenix

(2018) Maria F. Torres et al.   Nature Communications

Repeated translocation of a gene cassette drives sex-chromosome turnover in strawberries

(2018) Jacob A. Tennessen et al.   PLOS BIOLOGY

Molecular insights into the non-recombining nature of the spinach male-determining region

(2017) Tomohiro Kudoh et al.   MOLECULAR GENETICS AND GENOMICS

Gender-specific expression of GIBBERELLIC ACID INSENSITIVE is critical for unisexual organ initiation in dioecious Spinacia oleracea

(2017) Nicholas W. West et al.   NEW PHYTOLOGIST

Evolution of recombination rates between sex chromosomes

(2017) Deborah Charlesworth   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Draft genome of spinach and transcriptome diversity of 120 Spinacia accessions

(2017) Chenxi Xu et al.   Nature Communications

The asparagus genome sheds light on the origin and evolution of a young Y chromosome

(2017) Alex Harkess et al.   Nature Communications

Identification of RAN1 orthologue associated with sex determination through whole genome sequencing analysis in fig (Ficus carica L.)

(2017) Kazuki Mori et al.   Scientific Reports

Comparison of Spinach Sex Chromosomes with Sugar Beet Autosomes Reveals Extensive Synteny and Low Recombination at the Male-Determining Locus

(2016) Satoshi Takahata et al.   JOURNAL OF HEREDITY

A survey of the sorghum transcriptome using single-molecule long reads

(2016) Salah E. Abdel-Ghany et al.   Nature Communications

The Quest for Molecular Regulation Underlying Unisexual Flower Development

(2016) Rómulo Sobral et al.   Frontiers in Plant Science

New mechanistic links between sugar and hormone signalling networks

(2015) Karin Ljung et al.   CURRENT OPINION IN PLANT BIOLOGY

Roles of jasmonate signalling in plant inflorescence and flower development

(2015) Zheng Yuan et al.   CURRENT OPINION IN PLANT BIOLOGY

Recent Y chromosome divergence despite ancient origin of dioecy in poplars (Populus)

(2015) A. Geraldes et al.   MOLECULAR ECOLOGY

Sex-biased gene expression in dioecious garden asparagus (Asparagus officinalis)

(2015) Alex Harkess et al.   NEW PHYTOLOGIST

Plant contributions to our understanding of sex chromosome evolution

(2015) Deborah Charlesworth   NEW PHYTOLOGIST

Distinct regulation in inflorescence carbohydrate metabolism according to grapevine cultivars during floral development

(2015) Mélodie Sawicki et al.   PHYSIOLOGIA PLANTARUM

A Recently Evolved Isoform of the Transcription Factor BES1 Promotes Brassinosteroid Signaling and Development inArabidopsis thaliana

(2015) Jianjun Jiang et al.   PLANT CELL

Genome-Wide Analysis of Alternative Splicing Landscapes Modulated during Plant-Virus Interactions inBrachypodium distachyon

(2015) Kranthi K. Mandadi et al.   PLANT CELL

Leveraging transcript quantification for fast computation of alternative splicing profiles

(2015) Gael P. Alamancos et al.   RNA

A cucurbit androecy gene reveals how unisexual flowers develop and dioecy emerges

(2015) A. Boualem et al.   SCIENCE

ABA signalling is fine-tuned by antagonistic HAB1 variants

(2015) Zhijuan Wang et al.   Nature Communications

K-homology Nuclear Ribonucleoproteins Regulate Floral Organ Identity and Determinacy in Arabidopsis

(2015) Encarnación Rodríguez-Cazorla et al.   PLoS Genetics

Widespread Polycistronic Transcripts in Fungi Revealed by Single-Molecule mRNA Sequencing

(2015) Sean P. Gordon et al.   PLoS One

The relative and absolute frequencies of angiosperm sexual systems: Dioecy, monoecy, gynodioecy, and an updated online database

(2014) Susanne S. Renner   AMERICAN JOURNAL OF BOTANY

A small XY chromosomal region explains sex determination in wild dioecious V. vinifera and the reversal to hermaphroditism in domesticated grapevines

(2014) Sandrine Picq et al.   BMC PLANT BIOLOGY

Programmed Cell Death Controlled by ANAC033/SOMBRERO Determines Root Cap Organ Size in Arabidopsis

(2014) Matyáš Fendrych et al.   CURRENT BIOLOGY

Long Noncoding RNA Modulates Alternative Splicing Regulators in Arabidopsis

(2014) Florian Bardou et al.   DEVELOPMENTAL CELL

The Arabidopsis CALLOSE DEFECTIVE MICROSPORE1 Gene Is Required for Male Fertility through Regulating Callose Metabolism during Microsporogenesis

(2014) P. Lu et al.   PLANT PHYSIOLOGY

A Cucumber DELLA Homolog CsGAIP May Inhibit Staminate Development through Transcriptional Repression of B Class Floral Homeotic Genes

(2014) Yan Zhang et al.   PLoS One

A Y-chromosome-encoded small RNA acts as a sex determinant in persimmons

(2014) T. Akagi et al.   SCIENCE

Infernal 1.1: 100-fold faster RNA homology searches

(2013) E. P. Nawrocki et al.   BIOINFORMATICS

Identification of sex chromosome of spinach by physical mapping of 45s rDNAs by FISH

(2013) Chuanliang Deng et al.   CARYOLOGIA

Long Noncoding RNAs: Cellular Address Codes in Development and Disease

(2013) Pedro J. Batista et al.   CELL

Microdissection and painting of the Y chromosome in spinach (Spinacia oleracea)

(2013) Chuan-liang Deng et al.   JOURNAL OF PLANT RESEARCH

Regulation of Stamen Development by Coordinated Actions of Jasmonate, Auxin, and Gibberellin in Arabidopsis

(2013) Susheng Song et al.   Molecular Plant

Sucrose Induction of Anthocyanin Biosynthesis Is Mediated by DELLA

(2013) Yi Li et al.   Molecular Plant

A single-molecule long-read survey of the human transcriptome

(2013) Donald Sharon et al.   NATURE BIOTECHNOLOGY

Alternative cleavage and polyadenylation: extent, regulation and function

(2013) Ran Elkon et al.   NATURE REVIEWS GENETICS

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

(2013) Liang Sun et al.   NUCLEIC ACIDS RESEARCH

Control of Reproductive Floral Organ Identity Specification in Arabidopsis by the C Function Regulator AGAMOUS

(2013) D. S. O'Maoileidigh et al.   PLANT CELL

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

A tale of three next generation sequencing platforms: comparison of Ion torrent, pacific biosciences and illumina MiSeq sequencers

(2012) Michael Quail et al.   BMC GENOMICS

Candidate genes within a 143 kb region of the flower sex locus in Vitis

(2012) Iris Fechter et al.   MOLECULAR GENETICS AND GENOMICS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Alternative splicing of the auxin biosynthesis gene YUCCA4 determines its subcellular compartmentation

(2012) Verena Kriechbaumer et al.   PLANT JOURNAL

Molecular basis for the specification of floral organs by APETALA3 and PISTILLATA

(2012) S. E. Wuest et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A long noncoding RNA regulates photoperiod-sensitive male sterility, an essential component of hybrid rice

(2012) J. Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An Interaction Between BZR1 and DELLAs Mediates Direct Signaling Crosstalk Between Brassinosteroids and Gibberellins in Arabidopsis

(2012) Q.-F. Li et al.   Science Signaling

Integrating transcription kinetics with alternative polyadenylation and cell cycle control

(2012) Alexandra Moreira   Nucleus

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Mapping of the genes for dioecism and monoecism in Spinacia oleracea L.: evidence that both genes are closely linked

(2011) Yasuyuki Onodera et al.   PLANT CELL REPORTS

Circadian oscillation of gibberellin signaling in Arabidopsis

(2011) M. V. Arana et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Brassinosteroid control of sex determination in maize

(2011) T. Hartwig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple developmental processes underlie sex differentiation in angiosperms

(2011) Pamela K. Diggle et al.   TRENDS IN GENETICS

Functional analysis of B and C class floral organ genes in spinach demonstrates their role in sexual dimorphism

(2010) D Noah Sather et al.   BMC PLANT BIOLOGY

Sugar signalling is involved in the sex expression response of monoecious cucumber to low temperature

(2010) Minmin Miao et al.   JOURNAL OF EXPERIMENTAL BOTANY

Analysis ofTETRAKETIDE α-PYRONE REDUCTASEFunction inArabidopsis thalianaReveals a Previously Unknown, but Conserved, Biochemical Pathway in Sporopollenin Monomer Biosynthesis

(2010) Etienne Grienenberger et al.   PLANT CELL

A cis regulatory element in the TAPNAC promoter directs tapetal gene expression

(2010) Veria Y. Alvarado et al.   PLANT MOLECULAR BIOLOGY

Arabidopsis Basic Leucine-Zipper Transcription Factors TGA9 and TGA10 Interact with Floral Glutaredoxins ROXY1 and ROXY2 and Are Redundantly Required for Anther Development

(2010) J. Murmu et al.   PLANT PHYSIOLOGY

LAP5 and LAP6 Encode Anther-Specific Proteins with Similarity to Chalcone Synthase Essential for Pollen Exine Development in Arabidopsis

(2010) A. A. Dobritsa et al.   PLANT PHYSIOLOGY

Nuclear Activity of ROXY1, a Glutaredoxin Interacting with TGA Factors, Is Required for Petal Development in Arabidopsis thaliana

(2009) S. Li et al.   PLANT CELL

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

An anther-specific dihydroflavonol 4-reductase-like gene (DRL1 ) is essential for male fertility in Arabidopsis

(2008) Lee Kwan Tang et al.   NEW PHYTOLOGIST

Gibberellins, jasmonate and abscisic acid modulate the sucrose-induced expression of anthocyanin biosynthetic genes inArabidopsis

(2008) Elena Loreti et al.   NEW PHYTOLOGIST

Inactive Methyl Indole-3-Acetic Acid Ester Can Be Hydrolyzed and Activated by Several Esterases Belonging to the AtMES Esterase Family of Arabidopsis

(2008) Y. Yang et al.   PLANT PHYSIOLOGY