Metagenomic Analysis of the Virome of Mosquito Excreta

Viromics on Honey-Baited FTA Cards as a New Tool for the Detection of Circulating Viruses in Mosquitoes

(2020) Lotty Birnberg et al.   Viruses-Basel

Development and Field Evaluation of a System to Collect Mosquito Excreta for the Detection of Arboviruses

(2019) Dagmar B Meyer et al.   JOURNAL OF MEDICAL ENTOMOLOGY

Expanding the RNA Virosphere by Unbiased Metagenomics

(2019) Yong-Zhen Zhang et al.   Annual Review of Virology

Illumina sequencing of clinical samples for virus detection in a public health laboratory

(2019) Bixing Huang et al.   Scientific Reports

Stable distinct core eukaryotic viromes in different mosquito species from Guadeloupe, using single mosquito viral metagenomics

(2019) Chenyan Shi et al.   Microbiome

Sensitivity and specificity of metatranscriptomics as an arbovirus surveillance tool

(2019) Jana Batovska et al.   Scientific Reports

Virome of > 12 thousand Culex mosquitoes from throughout California

(2018) Mohammadreza Sadeghi et al.   VIROLOGY

Mosquito excreta: A sample type with many potential applications for the investigation of Ross River virus and West Nile virus ecology

(2018) Ana L. Ramírez et al.   PLoS Neglected Tropical Diseases

Isolation and characterization of a new iflavirus from Armigeres spp. mosquitoes in the Philippines

(2017) Daisuke Kobayashi et al.   JOURNAL OF GENERAL VIROLOGY

SMS: Smart Model Selection in PhyML

(2017) Vincent Lefort et al.   MOLECULAR BIOLOGY AND EVOLUTION

Metagenomics: The Next Culture-Independent Game Changer

(2017) Jessica D. Forbes et al.   Frontiers in Microbiology

A New Clade of Insect-Specific Flaviviruses from Australian Anopheles Mosquitoes Displays Species-Specific Host Restriction

(2017) Agathe M. G. Colmant et al.   mSphere

Commensal Viruses of Mosquitoes: Host Restriction, Transmission, and Interaction with Arboviral Pathogens

(2016) Roy A. Hall et al.   Evolutionary Bioinformatics

Redefining the invertebrate RNA virosphere

(2016) Mang Shi et al.   NATURE

Detection of Theileria orientalis in mosquito blood meals in the United Kingdom

(2016) M. Fernández de Marco et al.   VETERINARY PARASITOLOGY

MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data

(2016) Daniel H. Huson et al.   PLoS Computational Biology

Programmatic Use of Molecular Xenomonitoring at the Level of Evaluation Units to Assess Persistence of Lymphatic Filariasis in Sri Lanka

(2016) Ramakrishna U. Rao et al.   PLoS Neglected Tropical Diseases

Excretion of dengue virus RNA by Aedes aegypti allows non-destructive monitoring of viral dissemination in individual mosquitoes

(2016) Albin Fontaine et al.   Scientific Reports

Field Evaluation of Three New Mosquito Light Traps Against Two Standard Light Traps to Collect Mosquitoes (Diptera: Culicidae) and Non-Target Insects in Northeast Florida

(2015) Chun-Xiao Li et al.   FLORIDA ENTOMOLOGIST

Insect-Specific Virus Discovery: Significance for the Arbovirus Community

(2015) Bethany Bolling et al.   Viruses-Basel

Modular approach to customise sample preparation procedures for viral metagenomics: a reproducible protocol for virome analysis

(2015) Nádia Conceição-Neto et al.   Scientific Reports

Insect-specific viruses and their potential impact on arbovirus transmission

(2015) Nikos Vasilakis et al.   Current Opinion in Virology

Xenosurveillance: A Novel Mosquito-Based Approach for Examining the Human-Pathogen Landscape

(2015) Nathan D. Grubaugh et al.   PLoS Neglected Tropical Diseases

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

A New Species of Mesonivirus from the Northern Territory, Australia

(2014) David Warrilow et al.   PLoS One

A Simple Non-Powered Passive Trap for the Collection of Mosquitoes for Arbovirus Surveillance

(2013) Scott A. Ritchie et al.   JOURNAL OF MEDICAL ENTOMOLOGY

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Detection of Arboviruses and Other Micro-Organisms in Experimentally Infected Mosquitoes Using Massively Parallel Sequencing

(2013) Sonja Hall-Mendelin et al.   PLoS One

Applications of a Sugar-Based Surveillance System to Track Arboviruses in Wild Mosquito Populations

(2013) Andrew F. van den Hurk et al.   VECTOR-BORNE AND ZOONOTIC DISEASES

Enhanced arbovirus surveillance with deep sequencing: Identification of novel rhabdoviruses and bunyaviruses in Australian mosquitoes

(2013) Lark L. Coffey et al.   VIROLOGY

Descriptive overview of the 2011 epidemic of arboviral disease in horses in Australia

(2012) SE Roche et al.   AUSTRALIAN VETERINARY JOURNAL

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Sequence Analysis of the Human Virome in Febrile and Afebrile Children

(2012) Kristine M. Wylie et al.   PLoS One

Broad Surveys of DNA Viral Diversity Obtained through Viral Metagenomics of Mosquitoes

(2011) Terry Fei Fan Ng et al.   PLoS One

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Arboviruses Isolated from Mosquitoes Collected from Urban and Peri-urban Areas of Eastern Australia

(2009) Cassie C. Jansen et al.   JOURNAL OF THE AMERICAN MOSQUITO CONTROL ASSOCIATION

NCBI BLAST: a better web interface

(2008) M. Johnson et al.   NUCLEIC ACIDS RESEARCH

Detection of H5N1 Avian Influenza Virus from Mosquitoes Collected in an Infected Poultry Farm in Thailand

(2008) Philippe Barbazan et al.   VECTOR-BORNE AND ZOONOTIC DISEASES