Evaluation of fish biodiversity in estuaries using environmental DNA metabarcoding

Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methods

(2019) Kazuya Fujii et al.   PLoS One

Exact sequence variants should replace operational taxonomic units in marker-gene data analysis

(2017) Benjamin J Callahan et al.   ISME Journal

Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding

(2017) Elizabeth A. Andruszkiewicz et al.   PLoS One

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Use of environmental DNA to survey the distribution of an invasive submerged plant in ponds

(2016) Ayaka Fujiwara et al.   Freshwater Science

Use of environmental DNA to survey the distribution of an invasive submerged plant in ponds

(2016) Ayaka Fujiwara et al.   Freshwater Science

Monitoring the near-extinct European weather loach in Denmark based on environmental DNA from water samples

(2015) Eva Egelyng Sigsgaard et al.   BIOLOGICAL CONSERVATION

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Detection of invasive freshwater fish species using environmental DNA survey

(2014) Emre Keskin   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

Environmental Conditions Influence eDNA Persistence in Aquatic Systems

(2014) Matthew A. Barnes et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Transport Distance of Invertebrate Environmental DNA in a Natural River

(2014) Kristy Deiner et al.   PLoS One

Persistence of DNA in Carcasses, Slime and Avian Feces May Affect Interpretation of Environmental DNA Data

(2014) Christopher M. Merkes et al.   PLoS One

Managing Bay and Estuarine Ecosystems for Multiple Services

(2013) Lisa A. Needles et al.   Estuaries and Coasts

Improved detection of an alien invasive species through environmental DNA barcoding: the example of the American bullfrogLithobates catesbeianus

(2012) Tony Dejean et al.   JOURNAL OF APPLIED ECOLOGY

Environmental DNA

(2012) PIERRE TABERLET et al.   MOLECULAR ECOLOGY

Estimation of Fish Biomass Using Environmental DNA

(2012) Teruhiko Takahara et al.   PLoS One

pROC: an open-source package for R and S+ to analyze and compare ROC curves

(2011) Xavier Robin et al.   BMC BIOINFORMATICS

Plio-Pleistocene sea level and temperature fluctuations in the northwestern Pacific promoted speciation in the globally-distributed flathead mullet Mugil cephalus

(2011) Kang-Ning Shen et al.   BMC EVOLUTIONARY BIOLOGY

Meta-barcoding of ‘dirt’ DNA from soil reflects vertebrate biodiversity

(2011) KENNETH ANDERSEN et al.   MOLECULAR ECOLOGY

Monitoring endangered freshwater biodiversity using environmental DNA

(2011) PHILIP FRANCIS THOMSEN et al.   MOLECULAR ECOLOGY

Persistence of Environmental DNA in Freshwater Ecosystems

(2011) Tony Dejean et al.   PLoS One

“Sight-unseen” detection of rare aquatic species using environmental DNA

(2011) Christopher L. Jerde et al.   Conservation Letters

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Mercury in San Francisco Bay forage fish

(2010) Ben K. Greenfield et al.   ENVIRONMENTAL POLLUTION

Aquaculture Production and Biodiversity Conservation

(2009) James S. Diana   BIOSCIENCE

Temperature, selective mortality and early growth in the short-lived clupeidSpratelloides gracilis

(2009) E. D. H. Durieux et al.   JOURNAL OF FISH BIOLOGY

Species detection using environmental DNA from water samples

(2008) G. F. Ficetola et al.   Biology Letters