LncMirNet: Predicting LncRNA–miRNA Interaction Based on Deep Learning of Ribonucleic Acid Sequences

PmliPred: a method based on hybrid model and fuzzy decision for plant miRNA–lncRNA interaction prediction

(2020) Qiang Kang et al.   BIOINFORMATICS

NCResNet: Noncoding Ribonucleic Acid Prediction Based on a Deep Resident Network of Ribonucleic Acid Sequences

(2020) Sen Yang et al.   Frontiers in Genetics

Role-Based Graph Embeddings

(2020) Nesreen K. Ahmed et al.   IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING

CPPred: coding potential prediction based on the global description of RNA sequence

(2019) Xiaoxue Tong et al.   NUCLEIC ACIDS RESEARCH

Predicting lncRNA-miRNA Interaction via Graph Convolution Auto-Encoder

(2019) Yu-An Huang et al.   Frontiers in Genetics

BASiNET—BiologicAl Sequences NETwork: a case study on coding and non-coding RNAs identification

(2018) Eric Augusto Ito et al.   NUCLEIC ACIDS RESEARCH

Novel link prediction for large-scale miRNA-lncRNA interaction network in a bipartite graph

(2018) Zhi-An Huang et al.   BMC Medical Genomics

GENCODE reference annotation for the human and mouse genomes

(2018) Adam Frankish et al.   NUCLEIC ACIDS RESEARCH

miRBase: from microRNA sequences to function

(2018) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

A Peptide Encoded by a Putative lncRNA HOXB-AS3 Suppresses Colon Cancer Growth

(2017) Jin-Zhou Huang et al.   MOLECULAR CELL

lncRNASNP2: an updated database of functional SNPs and mutations in human and mouse lncRNAs

(2017) Ya-Ru Miao et al.   NUCLEIC ACIDS RESEARCH

LncRNA-mediated regulation of cell signaling in cancer

(2017) W-X Peng et al.   ONCOGENE

Deep learning in bioinformatics

(2016) Seonwoo Min et al.   BRIEFINGS IN BIOINFORMATICS

LncRNA HOXA11-AS Promotes Proliferation and Invasion of Gastric Cancer by Scaffolding the Chromatin Modification Factors PRC2, LSD1, and DNMT1

(2016) Ming Sun et al.   CANCER RESEARCH

LncRNA HOTAIR: A master regulator of chromatin dynamics and cancer

(2015) Arunoday Bhan et al.   BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER

Identification of microRNA precursor with the degenerate K-tuple or Kmer strategy

(2015) Bin Liu et al.   JOURNAL OF THEORETICAL BIOLOGY

LncRNA HOTAIR enhances ER signaling and confers tamoxifen resistance in breast cancer

(2015) X Xue et al.   ONCOGENE

Jumping NLP Curves: A Review of Natural Language Processing Research [Review Article]

(2014) Erik Cambria et al.   IEEE Computational Intelligence Magazine

The oestrogen receptor alpha-regulated lncRNA NEAT1 is a critical modulator of prostate cancer

(2014) Dimple Chakravarty et al.   Nature Communications

Searching the coding region for microRNA targets

(2013) R. M. Marin et al.   RNA

A Brief Review on the Mechanisms of miRNA Regulation

(2010) Yimei Cai et al.   GENOMICS PROTEOMICS & BIOINFORMATICS