Revealing secrets of the enigmatic omega subunit of bacterial RNA polymerase

Cyanobacterial sigma factors: Current and future applications for biotechnological advances

(2020) Amit Srivastava et al.   BIOTECHNOLOGY ADVANCES

In-cell architecture of an actively transcribing-translating expressome

(2020) Francis J. O’Reilly et al.   SCIENCE

Recent Advances in Understanding σ70-Dependent Transcription Initiation Mechanisms

(2019) Abhishek Mazumder et al.   JOURNAL OF MOLECULAR BIOLOGY

Where to Begin? Sigma factors and the selectivity of transcription initiation in Bacteria

(2019) John D. Helmann   MOLECULAR MICROBIOLOGY

The Mechanisms of Substrate Selection, Catalysis, and Translocation by the Elongating RNA Polymerase

(2019) Georgiy A. Belogurov et al.   JOURNAL OF MOLECULAR BIOLOGY

Unraveling the Role of Silent Mutation in the ω-Subunit of Escherichia coli RNA Polymerase: Structure Transition Inhibits Transcription

(2019) Unnatiben Rajeshbhai Patel et al.   ACS Omega

The role of ω-subunit of Escherichia coli RNA polymerase in stress response

(2018) Neerupma Bhardwaj et al.   GENES TO CELLS

Green magic: regulation of the chloroplast stress response by (p)ppGpp in plants and algae

(2018) Ben Field   JOURNAL OF EXPERIMENTAL BOTANY

Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA

(2018) Vadim Molodtsov et al.   MOLECULAR CELL

Inactivation of group 2 σ factors upregulates production of transcription and translation machineries in the cyanobacterium Synechocystis sp. PCC 6803

(2018) Satu Koskinen et al.   Scientific Reports

In-Culture Cross-Linking of Bacterial Cells Reveals Large-Scale Dynamic Protein–Protein Interactions at the Peptide Level

(2017) Luitzen de Jong et al.   JOURNAL OF PROTEOME RESEARCH

The Rhodobacter capsulatus gene transfer agent is induced by nutrient depletion and the RNAP omega subunit

(2017) Alexander B. Westbye et al.   MICROBIOLOGY-SGM

Acclimation to High CO 2 Requires the ω Subunit of the RNA Polymerase in Synechocystis

(2017) Juha Kurkela et al.   PLANT PHYSIOLOGY

Small Alarmone Synthetases as novel bacterial RNA-binding proteins

(2017) Vasili Hauryliuk et al.   RNA Biology

The ω Subunit Governs RNA Polymerase Stability and Transcriptional Specificity in Staphylococcus aureus

(2016) Andy Weiss et al.   JOURNAL OF BACTERIOLOGY

Study of O-Phosphorylation Sites in Proteins Involved in Photosynthesis-Related Processes in Synechocystis sp. Strain PCC 6803: Application of the SRM Approach

(2016) Martina Angeleri et al.   JOURNAL OF PROTEOME RESEARCH

ppGpp Binding to a Site at the RNAP-DksA Interface Accounts for Its Dramatic Effects on Transcription Initiation during the Stringent Response

(2016) Wilma Ross et al.   MOLECULAR CELL

UniProt: the universal protein knowledgebase

(2016)   NUCLEIC ACIDS RESEARCH

The stringent response regulates adaptation to darkness in the cyanobacteriumSynechococcus elongatus

(2016) Rachel D. Hood et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacillus subtilisδ Factor Functions as a Transcriptional Regulator by Facilitating the Open Complex Formation

(2015) Ranjit Kumar Prajapati et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Plastid RNA polymerases: orchestration of enzymes with different evolutionary origins controls chloroplast biogenesis during the plant life cycle

(2015) Thomas Pfannschmidt et al.   JOURNAL OF EXPERIMENTAL BOTANY

Molecular Mechanism and Evolution of Guanylate Kinase Regulation by (p)ppGpp

(2015) Kuanqing Liu et al.   MOLECULAR CELL

In vivorecruitment analysis and a mutant strain without any group 2 σ factor reveal roles of different σ factors in cyanobacteria

(2015) Satu Koskinen et al.   MOLECULAR MICROBIOLOGY

 , a New Subunit of RNA Polymerase Found in Gram-Positive Bacteria

(2014) A. N. Keller et al.   JOURNAL OF BACTERIOLOGY

The omega subunit of the RNA polymerase core directs transcription efficiency in cyanobacteria

(2014) Liisa Gunnelius et al.   NUCLEIC ACIDS RESEARCH

Deciphering key features in protein structures with the new ENDscript server

(2014) Xavier Robert et al.   NUCLEIC ACIDS RESEARCH

The ω Subunit of RNA Polymerase Is Essential for Thermal Acclimation of the Cyanobacterium Synechocystis Sp. PCC 6803

(2014) Liisa Gunnelius et al.   PLoS One

ppGpp Metabolism Is Involved in Heterocyst Development in the Cyanobacterium Anabaena sp. Strain PCC 7120

(2013) S.-R. Zhang et al.   JOURNAL OF BACTERIOLOGY

The   Subunit of RNA Polymerase Is Required for Rapid Changes in Gene Expression and Competitive Fitness of the Cell

(2013) A. Rabatinova et al.   JOURNAL OF BACTERIOLOGY

Inactivation of the Bacterial RNA Polymerase Due to Acquisition of Secondary Structure by the ω Subunit

(2013) Paramita Sarkar et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

X-ray Crystal Structure ofEscherichia coliRNA Polymerase σ70Holoenzyme

(2013) Katsuhiko S. Murakami   JOURNAL OF BIOLOGICAL CHEMISTRY

The Magic Spot: A ppGpp Binding Site on E. coli RNA Polymerase Responsible for Regulation of Transcription Initiation

(2013) Wilma Ross et al.   MOLECULAR CELL

The Mechanism of E. coli RNA Polymerase Regulation by ppGpp Is Suggested by the Structure of their Complex

(2013) Yuhong Zuo et al.   MOLECULAR CELL

Differential regulation by ppGpp versus pppGpp in Escherichia coli

(2013) Undine Mechold et al.   NUCLEIC ACIDS RESEARCH

Phage T7 Gp2 inhibition of Escherichia coli RNA polymerase involves misappropriation of  70 domain 1.1

(2013) B. Bae et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure and function of CarD, an essential mycobacterial transcription factor

(2013) D. B. Srivastava et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Direct Regulation of GTP Homeostasis by (p)ppGpp: A Critical Component of Viability and Stress Resistance

(2012) Allison Kriel et al.   MOLECULAR CELL

The RNA Polymerase Omega Factor RpoZ Is Regulated by PhoP and Has an Important Role in Antibiotic Biosynthesis and Morphological Differentiation in Streptomyces coelicolor

(2011) Fernando Santos-Beneit et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The dynamic protein partnership of RNA polymerase inBacillus subtilis

(2011) Olivier Delumeau et al.   PROTEOMICS

Identifying N60D mutation in ω subunit of Escherichia coli RNA polymerase by bottom-up proteomic approach

(2010) Varatharajan Sabareesh et al.   ANALYST

Small subunits of RNA polymerase: localization, levels and implications for core enzyme composition

(2010) G. P. Doherty et al.   MICROBIOLOGY-SGM

Bacterial Alarmone, Guanosine 5′-Diphosphate 3′-Diphosphate (ppGpp), Predominantly Binds the β′ Subunit of Plastid-Encoded Plastid RNA Polymerase in Chloroplasts

(2009) Michio Sato et al.   CHEMBIOCHEM

Transcription Activity of Individual rrn Operons in Bacillus subtilis Mutants Deficient in (p)ppGpp Synthetase Genes, relA, yjbM, and ywaC

(2009) Y. Natori et al.   JOURNAL OF BACTERIOLOGY

Molecular Evolution of Multisubunit RNA Polymerases: Structural Analysis

(2009) William J. Lane et al.   JOURNAL OF MOLECULAR BIOLOGY

Molecular Evolution of Multisubunit RNA Polymerases: Sequence Analysis

(2009) William J. Lane et al.   JOURNAL OF MOLECULAR BIOLOGY

Coexpression of ω subunit in E. coli is required for the maintenance of enzymatic activity of Xanthomonas campestris pv. campestris RNA polymerase

(2009) Ching-Yuan Cheng et al.   PROTEIN EXPRESSION AND PURIFICATION

Stringent promoter recognition and autoregulation by the group 3  -factor SigF in the cyanobacterium Synechocystis sp. strain PCC 6803

(2008) M. Asayama et al.   NUCLEIC ACIDS RESEARCH

Characterization of Single and Double Inactivation Strains Reveals New Physiological Roles for Group 2   Factors in the Cyanobacterium Synechocystis sp. PCC 6803

(2008) M. Pollari et al.   PLANT PHYSIOLOGY