16S rRNA Gene Copy Number Normalization Does Not Provide More Reliable Conclusions in Metataxonomic Surveys
出版年份 2020 全文链接
标题
16S rRNA Gene Copy Number Normalization Does Not Provide More Reliable Conclusions in Metataxonomic Surveys
作者
关键词
-
出版物
MICROBIAL ECOLOGY
Volume -, Issue -, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2020-08-30
DOI
10.1007/s00248-020-01586-7
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Consistent and correctable bias in metagenomic sequencing experiments
- (2019) Michael R McLaren et al. eLife
- Rarefaction, Alpha Diversity, and Statistics
- (2019) Amy D. Willis Frontiers in Microbiology
- Updating the 97% identity threshold for 16S ribosomal RNA OTUs
- (2018) Robert C Edgar BIOINFORMATICS
- Correcting for 16S rRNA gene copy numbers in microbiome surveys remains an unsolved problem
- (2018) Stilianos Louca et al. Microbiome
- Bacterial community changes in a glacial-fed Tibetan lake are correlated with glacial melting
- (2018) Keshao Liu et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Differential sensitivity of total and active soil microbial communities to drought and forest management
- (2017) Felipe Bastida et al. GLOBAL CHANGE BIOLOGY
- Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
- (2017) Benjamin J Callahan et al. ISME Journal
- Assessment of Common and Emerging Bioinformatics Pipelines for Targeted Metagenomics
- (2017) Léa Siegwald et al. PLoS One
- Misguided phylogenetic comparisons using DGGE excised bands may contaminate public sequence databases
- (2016) Victor Satler Pylro et al. JOURNAL OF MICROBIOLOGICAL METHODS
- DADA2: High-resolution sample inference from Illumina amplicon data
- (2016) Benjamin J Callahan et al. NATURE METHODS
- mockrobiota: a Public Resource for Microbiome Bioinformatics Benchmarking
- (2016) Nicholas A. Bokulich et al. mSystems
- Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
- (2016) Kristin Kaiser et al. Scientific Reports
- Vertical Distribution of Bacterial Community Diversity and Water Quality during the Reservoir Thermal Stratification
- (2015) Hai-Han Zhang et al. International Journal of Environmental Research and Public Health
- Bacterial Community Diversity of Oil-Contaminated Soils Assessed by High Throughput Sequencing of 16S rRNA Genes
- (2015) Mu Peng et al. International Journal of Environmental Research and Public Health
- Data analysis for 16S microbial profiling from different benchtop sequencing platforms
- (2014) Victor S. Pylro et al. JOURNAL OF MICROBIOLOGICAL METHODS
- rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development
- (2014) Steven F. Stoddard et al. NUCLEIC ACIDS RESEARCH
- CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction
- (2014) Florent E Angly et al. Microbiome
- Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
- (2013) Morgan G I Langille et al. NATURE BIOTECHNOLOGY
- The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses
- (2013) Tomáš Větrovský et al. PLoS One
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation