Genome analysis of Daldinia eschscholtzii strains UM 1400 and UM 1020, wood-decaying fungi isolated from human hosts

Correction: Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi

(2014) Zhongtao Zhao et al.   BMC GENOMICS

Methods of discovery and techniques to study endophytic fungi producing fuel-related hydrocarbons

(2014) Gary A. Strobel   NATURAL PRODUCT REPORTS

A Five-Year Survey of Dematiaceous Fungi in a Tropical Hospital Reveals Potential Opportunistic Species

(2014) Su Mei Yew et al.   PLoS One

A polyphasic taxonomy of Daldinia (Xylariaceae)1

(2014) Marc Stadler et al.   STUDIES IN MYCOLOGY

Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes

(2013) Anthony Levasseur et al.   Biotechnology for Biofuels

A new endophytic insect-associated Daldinia species, recognised from a comparison of secondary metabolite profiles and molecular phylogeny

(2013) Sylvie Pažoutová et al.   FUNGAL DIVERSITY

Stress adaptation in a pathogenic fungus

(2013) A. J. P. Brown et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

FSRD: fungal stress response database

(2013) Z. Karanyi et al.   Database-The Journal of Biological Databases and Curation

Aggregate reactivation mediated by the Hsp100 chaperones

(2012) Michal Zolkiewski et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Draft Genome Sequence of Daldinia eschscholzii Isolated from Blood Culture

(2012) Kee Peng Ng et al.   EUKARYOTIC CELL

Mannitol induces the conversion of conidia to chlamydospore-like structures that confer enhanced tolerance to heat, drought, and UV in Gibberella zeae

(2012) Hokyoung Son et al.   MICROBIOLOGICAL RESEARCH

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

(2012) Yanbin Yin et al.   NUCLEIC ACIDS RESEARCH

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

(2012) Robin A. Ohm et al.   PLoS Pathogens

Toward almost closed genomes with GapFiller

(2012) Marten Boetzer et al.   GENOME BIOLOGY

Identification of a Chitinase-modifying Protein fromFusarium verticillioides

(2011) Todd A. Naumann et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Immunosuppressive Polyketides from Mantis-AssociatedDaldinia eschscholzii

(2011) Ying L. Zhang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

MEROPS: the database of proteolytic enzymes, their substrates and inhibitors

(2011) N. D. Rawlings et al.   NUCLEIC ACIDS RESEARCH

Helicascolide C, a new lactone from an Indonesian marine algicolous strain of Daldinia eschscholzii (Xylariaceae, Ascomycota)

(2011) Kustiariyah Tarman et al.   Phytochemistry Letters

Comparative Transcriptome and Secretome Analysis of Wood Decay Fungi Postia placenta and Phanerochaete chrysosporium

(2010) A. Vanden Wymelenberg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Biosynthesis of lovastatin and related metabolites formed by fungal iterative PKS enzymes

(2010) Chantel D. Campbell et al.   BIOPOLYMERS

The flavohemoglobin BCFHG1 is the main NO detoxification system and confers protection against nitrosative conditions but is not a virulence factor in the fungal necrotroph Botrytis cinerea

(2010) Juan Luis Turrion-Gomez et al.   FUNGAL GENETICS AND BIOLOGY

SMURF: Genomic mapping of fungal secondary metabolite clusters

(2010) Nora Khaldi et al.   FUNGAL GENETICS AND BIOLOGY

The pH regulatory factor Pac1 regulates Tri gene expression and trichothecene production in Fusarium graminearum

(2010) Jawad Merhej et al.   FUNGAL GENETICS AND BIOLOGY

An efficient method for DNA extraction from Cladosporioid fungi

(2010) M.A. Moslem et al.   GENETICS AND MOLECULAR RESEARCH

Assembly of large genomes using second-generation sequencing

(2010) M. C. Schatz et al.   GENOME RESEARCH

High-quality draft assemblies of mammalian genomes from massively parallel sequence data

(2010) S. Gnerre et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

(2010) Isheng J Tsai et al.   GENOME BIOLOGY

Response to oxidative stress ofCoriolus versicolor induced by exogenous hydrogen peroxide and paraquat

(2009) Yunchen Zhao et al.   ANNALS OF MICROBIOLOGY

Nitrosative and oxidative stress responses in fungal pathogenicity

(2009) Alistair JP Brown et al.   CURRENT OPINION IN MICROBIOLOGY

De novo assembly of human genomes with massively parallel short read sequencing

(2009) R. Li et al.   GENOME RESEARCH

MoFLP1, encoding a novel fungal fasciclin-like protein, is involved in conidiation and pathogenicity in Magnaporthe oryzae

(2009) Tong-bao Liu et al.   Journal of Zhejiang University-SCIENCE B

Toxicity of Endophyte-Infected Tall Fescue Alkaloids and Grass Metabolites onPratylenchus scribneri

(2009) A. A. Bacetty et al.   PHYTOPATHOLOGY

Genome, transcriptome, and secretome analysis of wood decay fungusPostia placentasupports unique mechanisms of lignocellulose conversion

(2009) Diego Martinez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Unprecedented Immunosuppressive Polyketides fromDaldinia eschscholzii, a Mantis‐Associated Fungus

(2008) Ying Lao Zhang et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Assessing the gene space in draft genomes

(2008) Genis Parra et al.   NUCLEIC ACIDS RESEARCH

A novel thermostable endoglucanase from the wood-decaying fungus Daldinia eschscholzii (Ehrenb.:Fr.) Rehm

(2007) Aphichart Karnchanatat et al.   ENZYME AND MICROBIAL TECHNOLOGY

SREA is involved in regulation of siderophore biosynthesis, utilization and uptake in Aspergillus nidulans

(2003) Harald Oberegger et al.   MOLECULAR MICROBIOLOGY