RNA-seq analysis reveals genetic response and tolerance mechanisms to ozone exposure in soybean

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

(2014)   NATURE BIOTECHNOLOGY

Soil water stress affects both cuticular wax content and cuticle-related gene expression in young saplings of maritime pine (Pinus pinaster Ait)

(2013) Grégoire Le Provost et al.   BMC PLANT BIOLOGY

The Effects of Tropospheric Ozone on Net Primary Productivity and Implications for Climate Change

(2012) Elizabeth A. Ainsworth et al.   Annual Review of Plant Biology

RSeQC: quality control of RNA-seq experiments

(2012) Liguo Wang et al.   BIOINFORMATICS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

From climate change to molecular response: redox proteomics of ozone-induced responses in soybean

(2012) Ashley Galant et al.   NEW PHYTOLOGIST

An investigation of widespread ozone damage to the soybean crop in the upper Midwest determined from ground-based and satellite measurements

(2010) Jack Fishman et al.   ATMOSPHERIC ENVIRONMENT

Effects of Reactive Oxygen Species Metabolic System on Soybean (Glycine max) Under Exogenous Chitosan to Ozone Stress

(2010) Tian Hong Zhao et al.   BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Plant cuticles shine: advances in wax biosynthesis and export

(2009) Ljerka Kunst et al.   CURRENT OPINION IN PLANT BIOLOGY

Foliar resistance to ozone injury in the genetic base of U.S. and Canadian soybean and prediction of resistance in descendent cultivars using coefficient of parentage

(2009) Kent O. Burkey et al.   FIELD CROPS RESEARCH

The Ozone Component of Global Change: Potential Effects on Agricultural and Horticultural Plant Yield, Product Quality and Interactions with Invasive Species

(2009) Fitzgerald Booker et al.   Journal of Integrative Plant Biology

SoyBase, the USDA-ARS soybean genetics and genomics database

(2009) David Grant et al.   NUCLEIC ACIDS RESEARCH

Genotypic variation in tolerance to elevated ozone in rice: dissection of distinct genetic factors linked to tolerance mechanisms

(2008) Michael Frei et al.   JOURNAL OF EXPERIMENTAL BOTANY

Analysis of the ozone effect on soybean in the Mediterranean region

(2007) Maher Bou Jaoudé et al.   EUROPEAN JOURNAL OF AGRONOMY