Twadn: an efficient alignment algorithm based on time warping for pairwise dynamic networks

OMeta: an ontology-based, data-driven metadata tracking system

(2019) Indresh Singh et al.   BMC BIOINFORMATICS

A New Panel-Based Next-Generation Sequencing Method for ADME Genes Reveals Novel Associations of Common and Rare Variants With Expression in a Human Liver Cohort

(2019) Kathrin Klein et al.   Frontiers in Genetics

A novel algorithm based on bi-random walks to identify disease-related lncRNAs

(2019) Jialu Hu et al.   BMC BIOINFORMATICS

A novel algorithm for alignment of multiple PPI networks based on simulated annealing

(2019) Jialu Hu et al.   BMC GENOMICS

KF-finder: identification of key factors from host-microbial networks in cervical cancer

(2018) Jialu Hu et al.   BMC Systems Biology

Detection of Network Motif Based on a Novel Graph Canonization Algorithm from Transcriptional Regulation Networks

(2017) Jialu Hu et al.   MOLECULES

MAGNA++: Maximizing Accuracy in Global Network Alignment via both node and edge conservation

(2015) V. Vijayan et al.   BIOINFORMATICS

Modern temporal network theory: a colloquium

(2015) Petter Holme   EUROPEAN PHYSICAL JOURNAL B

LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks

(2014) Jialu Hu et al.   BIOINFORMATICS

MAGNA: Maximizing Accuracy in Global Network Alignment

(2014) Vikram Saraph et al.   BIOINFORMATICS

NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks

(2013) Jialu Hu et al.   BIOINFORMATICS

NETAL: a new graph-based method for global alignment of protein–protein interaction networks

(2013) Behnam Neyshabur et al.   BIOINFORMATICS

SMETANA: Accurate and Scalable Algorithm for Probabilistic Alignment of Large-Scale Biological Networks

(2013) Sayed Mohammad Ebrahim Sahraeian et al.   PLoS One

IsoRankN: spectral methods for global alignment of multiple protein networks

(2009) C.-S. Liao et al.   BIOINFORMATICS

NetworkBLAST: comparative analysis of protein networks

(2008) M. Kalaev et al.   BIOINFORMATICS