Simultaneous detection of native and invasive crayfish and Aphanomyces astaci from environmental DNA samples in a wide range of habitats in Central Europe

Crayfish plague in Czechia: Outbreaks from novel sources and testing for chronic infections

(2020) Michaela Mojžišová et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Effect of water temperature and fish biomass on environmental DNA shedding, degradation, and size distribution

(2019) Toshiaki Jo et al.   Ecology and Evolution

Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global eDNA

(2019) Krista M. Ruppert et al.   Global Ecology and Conservation

Ecological plasticity and commercial impact of invasive marbled crayfish populations in Madagascar

(2019) Ranja Andriantsoa et al.   BMC ECOLOGY

Introducing a new Austropotamobius crayfish species (Crustacea, Decapoda, Astacidae): A Miocene endemism of the Apuseni Mountains, Romania

(2019) Lucian Pârvulescu   ZOOLOGISCHER ANZEIGER

Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methods

(2019) Kazuya Fujii et al.   PLoS One

Monitoring a Norwegian freshwater crayfish tragedy:  eDNA snapshots of invasion, infection and extinction

(2019) David A. Strand et al.   JOURNAL OF APPLIED ECOLOGY

Estimating native and invasive crayfish distributions in relation to culvert barriers with environmental DNA

(2019) Kousuke Ikeda et al.   Freshwater Science

A practical guide to sample preservation and pre‐PCR processing of aquatic environmental DNA

(2019) Girish Kumar et al.   Molecular Ecology Resources

Simultaneous detection of invasive signal crayfish, endangered white-clawed crayfish and the crayfish plague pathogen using environmental DNA

(2018) Chloe Victoria Robinson et al.   BIOLOGICAL CONSERVATION

Environmental DNA detects a rare large river crayfish but with little relation to local abundance

(2018) Christopher J. Rice et al.   FRESHWATER BIOLOGY

Environmental DNA (eDNA) applications for the conservation of imperiled crayfish (Decapoda: Astacidea) through monitoring of invasive species barriers and relocated populations

(2018) Dominique A Cowart et al.   JOURNAL OF CRUSTACEAN BIOLOGY

Catching the fish with the worm: a case study on eDNA detection of the monogenean parasite Gyrodactylus salaris and two of its hosts, Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss)

(2018) Johannes C. Rusch et al.   Parasites & Vectors

ANDe™ : A fully integrated environmental DNA sampling system

(2018) Austen C. Thomas et al.   Methods in Ecology and Evolution

Repurposing environmental DNA samples-detecting the western pearlshell (Margaritifera falcata ) as a proof of concept

(2018) Joseph C. Dysthe et al.   Ecology and Evolution

Searching for a signal: Environmental DNA (eDNA) for the detection of invasive signal crayfish, Pacifastacus leniusculus (Dana, 1852)

(2018) Kirsten Harper et al.   Management of Biological Invasions

Clonal genome evolution and rapid invasive spread of the marbled crayfish

(2018) Julian Gutekunst et al.   Nature Ecology & Evolution

Prospects and challenges of environmental DNA (eDNA) monitoring in freshwater ponds

(2018) Lynsey R. Harper et al.   HYDROBIOLOGIA

Behavioral differences in an over-invasion scenario: marbled vs. spiny-cheek crayfish

(2018) Stefan M. Linzmaier et al.   Ecosphere

eDNA-based crayfish plague detection as practical tool for biomonitoring and risk assessment of A. astaci-positive crayfish populations

(2018) Claudia Wittwer et al.   BIOLOGICAL INVASIONS

Environmental DNA as an efficient tool for detecting invasive crayfishes in freshwater ponds

(2017) Quentin Mauvisseau et al.   HYDROBIOLOGIA

Environmental DNA (eDNA) detects the invasive crayfishes Orconectes rusticus and Pacifastacus leniusculus in large lakes of North America

(2017) Eric R. Larson et al.   HYDROBIOLOGIA

eDNA-based crayfish plague monitoring is superior to conventional trap-based assessments in year-round detection probability

(2017) Claudia Wittwer et al.   HYDROBIOLOGIA

Mitochondrial DNA provides evidence of a double origin for the stone crayfish Austropotamobius torrentium in the Elbe basin

(2017) Adam Petrusek et al.   LIMNOLOGICA

ednaoccupancy : An r package for multiscale occupancy modelling of environmental DNA data

(2017) Robert M. Dorazio et al.   Molecular Ecology Resources

Using eDNA to detect the distribution and density of invasive crayfish in the Honghe-Hani rice terrace World Heritage site

(2017) Wang Cai et al.   PLoS One

Behavior and season affect crayfish detection and density inference using environmental DNA

(2017) Nicholas Dunn et al.   Ecology and Evolution

High genetic variation of invasive signal crayfish in Europe reflects multiple introductions and secondary translocations

(2017) Adam Petrusek et al.   Freshwater Science

High genetic variation of invasive signal crayfish in Europe reflects multiple introductions and secondary translocations

(2017) Adam Petrusek et al.   Freshwater Science

Monitoring of noble, signal and narrow-clawed crayfish using environmental DNA from freshwater samples

(2017) Sune Agersnap et al.   PLoS One

Seasonal variation in environmental DNA in relation to population size and environmental factors

(2017) Andrew S. Buxton et al.   Scientific Reports

Predictions of marbled crayfish establishment in conurbations fulfilled: Evidences from the Czech Republic

(2016) Jiří Patoka et al.   BIOLOGIA

Environmental DNA (eDNA) detects the invasive rusty crayfish Orconectes rusticus at low abundances

(2016) Matthew M. Dougherty et al.   JOURNAL OF APPLIED ECOLOGY

Hosts and transmission of the crayfish plague pathogenAphanomyces astaci: a review

(2016) J Svoboda et al.   JOURNAL OF FISH DISEASES

Can environmental DNA (eDNA) be used for detection and monitoring of introduced crab species in the Baltic Sea?

(2016) Tiia Forsström et al.   MARINE POLLUTION BULLETIN

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding

(2016) Alice Valentini et al.   MOLECULAR ECOLOGY

Environmental DNA reveals that rivers are conveyer belts of biodiversity information

(2016) Kristy Deiner et al.   Nature Communications

Using environmental DNA to detect an endangered crayfish Cambaroides japonicus in streams

(2016) Kousuke Ikeda et al.   Conservation Genetics Resources

Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity

(2015) Philip Francis Thomsen et al.   BIOLOGICAL CONSERVATION

Fishing in the Water: Effect of Sampled Water Volume on Environmental DNA-Based Detection of Macroinvertebrates

(2015) Elvira Mächler et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Environmental Monitoring: Inferring the Diatom Index from Next-Generation Sequencing Data

(2015) Joana Amorim Visco et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Assessing the importance of food for improving noble crayfish culture conditions

(2015) J.C. Rusch et al.   Knowledge and Management of Aquatic Ecosystems

First record of an introduced population of the southern lineage of white-clawed crayfish (Austropotamobius ‘italicus’) north of the Alps

(2015) C. Chucholl et al.   Knowledge and Management of Aquatic Ecosystems

Eukaryotic plankton diversity in the sunlit ocean

(2015) C. de Vargas et al.   SCIENCE

Trade of ornamental crayfish in Europe as a possible introduction pathway for important crustacean diseases: crayfish plague and white spot syndrome

(2014) A. Mrugała et al.   BIOLOGICAL INVASIONS

Status and recovery of indigenous crayfish populations after recent crayfish plague outbreaks in the Czech Republic

(2014) E. Kozubíková-Balcarová et al.   ETHOLOGY ECOLOGY & EVOLUTION

Environmental DNA surveillance for invertebrate species: advantages and technical limitations to detect invasive crayfishProcambarus clarkiiin freshwater ponds

(2014) Anne Tréguier et al.   JOURNAL OF APPLIED ECOLOGY

Survey of the crayfish plague pathogen presence in the Netherlands reveals a new Aphanomyces astaci carrier

(2014) M. Tilmans et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Resistance to the crayfish plague pathogen, Aphanomyces astaci, in two freshwater shrimps

(2014) J. Svoboda et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Continental-wide distribution of crayfish species in Europe: update and maps

(2014) A. Kouba et al.   Knowledge and Management of Aquatic Ecosystems

Transport Distance of Invertebrate Environmental DNA in a Natural River

(2014) Kristy Deiner et al.   PLoS One

Microsatellite markers for direct genotyping of the crayfish plague pathogen Aphanomyces astaci (Oomycetes) from infected host tissues

(2014) Frédéric Grandjean et al.   VETERINARY MICROBIOLOGY

Molecular detection and genotyping of Aphanomyces astaci directly from preserved crayfish samples uncovers the Norwegian crayfish plague disease history

(2014) Trude Vrålstad et al.   VETERINARY MICROBIOLOGY

Absence of the crayfish plague pathogen (Aphanomyces astaci) facilitates coexistence of European and American crayfish in central Europe

(2013) ANNE SCHRIMPF et al.   FRESHWATER BIOLOGY

Role of the Dinaric Karst (western Balkans) in shaping the phylogeographic structure of the threatened crayfishAustropotamobius torrentium

(2013) GÖRAN I. V. KLOBUČAR et al.   FRESHWATER BIOLOGY

Detection of crayfish plague spores in large freshwater systems

(2013) David A. Strand et al.   JOURNAL OF APPLIED ECOLOGY

Temporal dynamics of spore release of the crayfish plague pathogen from its natural host, American spiny-cheek crayfish (Orconectes limosus), evaluated by transmission experiments

(2013) J. SVOBODA et al.   PARASITOLOGY

Using Environmental DNA to Estimate the Distribution of an Invasive Fish Species in Ponds

(2013) Teruhiko Takahara et al.   PLoS One

Site occupancy models in the analysis of environmental DNA presence/absence surveys: a case study of an emerging amphibian pathogen

(2013) Benedikt R. Schmidt et al.   Methods in Ecology and Evolution

The relationship between water quality and indigenous and alien crayfish distribution in the Czech Republic: patterns and conservation implications

(2012) Jitka Svobodová et al.   AQUATIC CONSERVATION-MARINE AND FRESHWATER ECOSYSTEMS

Invaders for sale: trade and determinants of introduction of ornamental freshwater crayfish

(2012) Christoph Chucholl   BIOLOGICAL INVASIONS

Detection of a Diverse Marine Fish Fauna Using Environmental DNA from Seawater Samples

(2012) Philip Francis Thomsen et al.   PLoS One

Monitoring the spore dynamics of Aphanomyces astaci in the ambient water of latent carrier crayfish

(2012) David A. Strand et al.   VETERINARY MICROBIOLOGY

Timing and quantifying Aphanomyces astaci sporulation from the noble crayfish suffering from the crayfish plague

(2012) J. Makkonen et al.   VETERINARY MICROBIOLOGY

Potent infection reservoir of crayfish plague now permanently established in Norway

(2011) T Vrålstad et al.   DISEASES OF AQUATIC ORGANISMS

Re-examination of the prevalence of Aphanomyces astaci in North American crayfish populations in Central Europe by TaqMan MGB real-time PCR

(2011) E Kozubíková et al.   DISEASES OF AQUATIC ORGANISMS

Detection and quantification of the crayfish plague agent in natural waters: direct monitoring approach for aquatic environments

(2011) DA Strand et al.   DISEASES OF AQUATIC ORGANISMS

Temporal variation in the prevalence of the crayfish plague pathogen,Aphanomyces astaci, in three Czech spiny-cheek crayfish populations

(2011) K. Matasová et al.   Knowledge and Management of Aquatic Ecosystems

Identification of exotic North American crayfish in Europe by DNA barcoding

(2011) L. Filipová et al.   Knowledge and Management of Aquatic Ecosystems

Monitoring endangered freshwater biodiversity using environmental DNA

(2011) PHILIP FRANCIS THOMSEN et al.   MOLECULAR ECOLOGY

Persistence of Environmental DNA in Freshwater Ecosystems

(2011) Tony Dejean et al.   PLoS One

“Sight-unseen” detection of rare aquatic species using environmental DNA

(2011) Christopher L. Jerde et al.   Conservation Letters

Non-indigenous signal crayfish Pacifastacus leniusculus are now common in Danish streams: preliminary status for national distribution and protective actions

(2010) Christian Skov et al.   BIOLOGICAL INVASIONS

Recent distribution, population densities and ecological requirements of the stone crayfish (Austropotamobius torrentium) in the Czech Republic

(2010) P. Vlach et al.   Knowledge and Management of Aquatic Ecosystems

Invasive non-indigenous crayfish species in Europe: Recommendations on managing them

(2010) S. Peay   Knowledge and Management of Aquatic Ecosystems

A review of the ever increasing threat to European crayfish from non-indigenous crayfish species

(2010) D.M. Holdich et al.   Knowledge and Management of Aquatic Ecosystems

Cryptic diversity within the invasive virile crayfish Orconectes virilis (Hagen, 1870) species complex: new lineages recorded in both native and introduced ranges

(2009) Lenka Filipová et al.   BIOLOGICAL INVASIONS

Prevalence of the Crayfish Plague PathogenAphanomyces astaciin Invasive American Crayfishes in the Czech Republic

(2009) EVA KOZUBÍKOVÁ et al.   CONSERVATION BIOLOGY

A quantitative TaqMan® MGB real-time polymerase chain reaction based assay for detection of the causative agent of crayfish plague Aphanomyces astaci

(2009) Trude Vrålstad et al.   VETERINARY MICROBIOLOGY

A statistical approach for evaluation of PCR results to improve the practical limit of quantification (LOQ) of GMO analyses (SIMQUANT)

(2008) Knut G. Berdal et al.   EUROPEAN FOOD RESEARCH AND TECHNOLOGY

The old menace is back: Recent crayfish plague outbreaks in the Czech Republic

(2007) E. Kozubíková et al.   AQUACULTURE