标题
Prospects and challenges of environmental DNA (eDNA) monitoring in freshwater ponds
作者
关键词
Aquatic, Biodiversity, Lentic, Metabarcoding, Quantitative PCR, Survey
出版物
HYDROBIOLOGIA
Volume -, Issue -, Pages -
出版商
Springer Nature America, Inc
发表日期
2018-09-03
DOI
10.1007/s10750-018-3750-5
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Detection of the European pond turtle (Emys orbicularis) by environmental DNA: is eDNA adequate for reptiles?
- (2018) Matthieu Raemy et al. AMPHIBIA-REPTILIA
- Simultaneous detection of invasive signal crayfish, endangered white-clawed crayfish and the crayfish plague pathogen using environmental DNA
- (2018) Chloe Victoria Robinson et al. BIOLOGICAL CONSERVATION
- Concentrations of environmental DNA (eDNA) reflect spawning salmon abundance at fine spatial and temporal scales
- (2018) Michael D. Tillotson et al. BIOLOGICAL CONSERVATION
- The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding
- (2018) Jianlong Li et al. Molecular Ecology Resources
- Beyond the swab: ecosystem sampling to understand the persistence of an amphibian pathogen
- (2018) Brittany A. Mosher et al. OECOLOGIA
- Seasonal variation in environmental DNA detection in sediment and water samples
- (2018) Andrew S. Buxton et al. PLoS One
- Degradation and dispersion limit environmental DNA detection of rare amphibians in wetlands: Increasing efficacy of sampling designs
- (2018) Caren S. Goldberg et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Implementation options for DNA-based identification into ecological status assessment under the European Water Framework Directive
- (2018) Daniel Hering et al. WATER RESEARCH
- New policy directions for global pond conservation
- (2018) Matthew J. Hill et al. Conservation Letters
- Demonstration of the potential of environmental DNA as a tool for the detection of avian species
- (2018) Masayuki Ushio et al. Scientific Reports
- Needle in a haystack? A comparison of eDNA metabarcoding and targeted qPCR for detection of the great crested newt (Triturus cristatus )
- (2018) Lynsey R. Harper et al. Ecology and Evolution
- Searching for a signal: Environmental DNA (eDNA) for the detection of invasive signal crayfish, Pacifastacus leniusculus (Dana, 1852)
- (2018) Kirsten Harper et al. Management of Biological Invasions
- Accuracy, limitations and cost efficiency of eDNA-based community survey in tropical frogs
- (2018) Miklós Bálint et al. Molecular Ecology Resources
- Primary production in nutrient-rich kettle holes and consequences for nutrient and carbon cycling
- (2017) Garabet Kazanjian et al. HYDROBIOLOGIA
- Environmental DNA as an efficient tool for detecting invasive crayfishes in freshwater ponds
- (2017) Quentin Mauvisseau et al. HYDROBIOLOGIA
- Environmental DNA (eDNA) detects the invasive crayfishes Orconectes rusticus and Pacifastacus leniusculus in large lakes of North America
- (2017) Eric R. Larson et al. HYDROBIOLOGIA
- Mission possible: diatoms can be used to infer past duckweed (lemnoid Araceae) dominance in ponds
- (2017) Dave Emson et al. JOURNAL OF PALEOLIMNOLOGY
- Seasonal and diel signature of eastern hellbender environmental DNA
- (2017) Mizuki K. Takahashi et al. JOURNAL OF WILDLIFE MANAGEMENT
- Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
- (2017) Kristy Deiner et al. MOLECULAR ECOLOGY
- Environmental DNA enables detection of terrestrial mammals from forest pond water
- (2017) Masayuki Ushio et al. Molecular Ecology Resources
- Is the detection of aquatic environmental DNA influenced by substrate type?
- (2017) Andrew S. Buxton et al. PLoS One
- Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity
- (2017) Iliana Bista et al. Nature Communications
- Evaluation of eDNA for groundwater invertebrate detection and monitoring: a case study with endangered Stygobromus (Amphipoda: Crangonyctidae)
- (2017) Matthew L. Niemiller et al. Conservation Genetics Resources
- Behavior and season affect crayfish detection and density inference using environmental DNA
- (2017) Nicholas Dunn et al. Ecology and Evolution
- Detection of an endangered aquatic heteropteran using environmental DNA in a wetland ecosystem
- (2017) Hideyuki Doi et al. Royal Society Open Science
- Environmental DNA Detection of the Golden Tree Frog (Phytotriades auratus) in Bromeliads
- (2017) Jack D. Torresdal et al. PLoS One
- Application of environmental DNA to detect an endangered marine skate species in the wild
- (2017) Kay Weltz et al. PLoS One
- Monitoring of noble, signal and narrow-clawed crayfish using environmental DNA from freshwater samples
- (2017) Sune Agersnap et al. PLoS One
- Environmental DNA (eDNA) metabarcoding assays to detect invasive invertebrate species in the Great Lakes
- (2017) Katy E. Klymus et al. PLoS One
- Methods to maximise recovery of environmental DNA from water samples
- (2017) Rheyda Hinlo et al. PLoS One
- Seasonal variation in environmental DNA in relation to population size and environmental factors
- (2017) Andrew S. Buxton et al. Scientific Reports
- The importance of small waterbodies for biodiversity and ecosystem services: implications for policy makers
- (2016) J. Biggs et al. HYDROBIOLOGIA
- A simple method for preserving environmental DNA in water samples at ambient temperature by addition of cationic surfactant
- (2016) Hiroki Yamanaka et al. LIMNOLOGY
- Environmental DNA metabarcoding of lake fish communities reflects long-term data from established survey methods
- (2016) Bernd Hänfling et al. MOLECULAR ECOLOGY
- Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding
- (2016) Alice Valentini et al. MOLECULAR ECOLOGY
- Fine-tuning for the tropics: application of eDNA technology for invasive fish detection in tropical freshwater ecosystems
- (2016) Heather L. A. Robson et al. Molecular Ecology Resources
- Environmental DNA reveals that rivers are conveyer belts of biodiversity information
- (2016) Kristy Deiner et al. Nature Communications
- Comparison of capture and storage methods for aqueous macrobial eDNA using an optimized extraction protocol: advantage of enclosed filter
- (2016) Johan Spens et al. Methods in Ecology and Evolution
- Critical considerations for the application of environmental DNA methods to detect aquatic species
- (2016) Caren S. Goldberg et al. Methods in Ecology and Evolution
- Testing the potential of a ribosomal 16S marker for DNA metabarcoding of insects
- (2016) Vasco Elbrecht et al. PeerJ
- Potential of Environmental DNA to Evaluate Northern Pike (Esox lucius) Eradication Efforts: An Experimental Test and Case Study
- (2016) Kristine J. Dunker et al. PLoS One
- Environmental DNA (eDNA) Detection Probability Is Influenced by Seasonal Activity of Organisms
- (2016) Lesley S. de Souza et al. PLoS One
- Quantifying effects of UV-B, temperature, and pH on eDNA degradation in aquatic microcosms
- (2015) Katherine M. Strickler et al. BIOLOGICAL CONSERVATION
- Using environmental DNA methods to improve detectability in a hellbender (Cryptobranchus alleganiensis) monitoring program
- (2015) Stephen F. Spear et al. BIOLOGICAL CONSERVATION
- The effect of dilution and the use of a post-extraction nucleic acid purification column on the accuracy, precision, and inhibition of environmental DNA samples
- (2015) Anna M. McKee et al. BIOLOGICAL CONSERVATION
- Effects of sample processing on the detection rate of environmental DNA from the Common Carp (Cyprinus carpio)
- (2015) Teruhiko Takahara et al. BIOLOGICAL CONSERVATION
- Fish environmental DNA is more concentrated in aquatic sediments than surface water
- (2015) Cameron R. Turner et al. BIOLOGICAL CONSERVATION
- Environmental DNA – An emerging tool in conservation for monitoring past and present biodiversity
- (2015) Philip Francis Thomsen et al. BIOLOGICAL CONSERVATION
- Using eDNA to develop a national citizen science-based monitoring programme for the great crested newt (Triturus cristatus)
- (2015) Jeremy Biggs et al. BIOLOGICAL CONSERVATION
- How will the ‘molecular revolution’ contribute to biological recording?
- (2015) Lori Lawson Handley BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY
- DNA metabarcoding of insects and allies: an evaluation of primers and pipelines
- (2015) G.-J. Brandon-Mong et al. BULLETIN OF ENTOMOLOGICAL RESEARCH
- The ecology of environmental DNA and implications for conservation genetics
- (2015) Matthew A. Barnes et al. CONSERVATION GENETICS
- Environmental DNA sampling is more sensitive than a traditional survey technique for detecting an aquatic invader
- (2015) Adam S. Smart et al. ECOLOGICAL APPLICATIONS
- Droplet Digital Polymerase Chain Reaction (PCR) Outperforms Real-Time PCR in the Detection of Environmental DNA from an Invasive Fish Species
- (2015) Hideyuki Doi et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Quantification of mesocosm fish and amphibian species diversity via environmental DNA metabarcoding
- (2015) Nathan T. Evans et al. Molecular Ecology Resources
- Use of Droplet Digital PCR for Estimation of Fish Abundance and Biomass in Environmental DNA Surveys
- (2015) Hideyuki Doi et al. PLoS One
- Can DNA-Based Ecosystem Assessments Quantify Species Abundance? Testing Primer Bias and Biomass—Sequence Relationships with an Innovative Metabarcoding Protocol
- (2015) Vasco Elbrecht et al. PLoS One
- Quantifying Environmental DNA Signals for Aquatic Invasive Species Across Multiple Detection Platforms
- (2014) Lucas M. Nathan et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- Environmental DNA surveillance for invertebrate species: advantages and technical limitations to detect invasive crayfishProcambarus clarkiiin freshwater ponds
- (2014) Anne Tréguier et al. JOURNAL OF APPLIED ECOLOGY
- REVIEW: The detection of aquatic animal species using environmental DNA - a review of eDNA as a survey tool in ecology
- (2014) Helen C. Rees et al. JOURNAL OF APPLIED ECOLOGY
- Distance, flow and PCR inhibition: eDNA dynamics in two headwater streams
- (2014) Stephen F. Jane et al. Molecular Ecology Resources
- The Relationship between the Distribution of Common Carp and Their Environmental DNA in a Small Lake
- (2014) Jessica J. Eichmiller et al. PLoS One
- Particle size distribution and optimal capture of aqueous macrobial eDNA
- (2014) Cameron R. Turner et al. Methods in Ecology and Evolution
- The application of eDNA for monitoring of the Great Crested Newt in the UK
- (2014) Helen C. Rees et al. Ecology and Evolution
- A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application for characterizing coral reef fish gut contents
- (2013) Matthieu Leray et al. Frontiers in Zoology
- Inhibition of DNA Polymerases Used in Q-PCR by Structurally Different Soil-Derived Humic Substances
- (2013) Christian Nyrop Albers et al. GEOMICROBIOLOGY JOURNAL
- Detection of crayfish plague spores in large freshwater systems
- (2013) David A. Strand et al. JOURNAL OF APPLIED ECOLOGY
- Detecting an elusive invasive species: a diagnostic PCR to detect Burmese python in Florida waters and an assessment of persistence of environmental DNA
- (2013) Antoinette J. Piaggio et al. Molecular Ecology Resources
- Batrachochytrium salamandrivorans sp. nov. causes lethal chytridiomycosis in amphibians
- (2013) A. Martel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Site occupancy models in the analysis of environmental DNA presence/absence surveys: a case study of an emerging amphibian pathogen
- (2013) Benedikt R. Schmidt et al. Methods in Ecology and Evolution
- Environmental DNA as a new method for early detection of New Zealand mudsnails (Potamopyrgus antipodarum)
- (2013) Caren S. Goldberg et al. Freshwater Science
- Estimation of Fish Biomass Using Environmental DNA
- (2012) Teruhiko Takahara et al. PLoS One
- Forensic implications of PCR inhibition—A review
- (2011) Reza Alaeddini Forensic Science International-Genetics
- Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA
- (2011) SANNE BOESSENKOOL et al. MOLECULAR ECOLOGY
- Monitoring endangered freshwater biodiversity using environmental DNA
- (2011) PHILIP FRANCIS THOMSEN et al. MOLECULAR ECOLOGY
- Taxon-specific PCR for DNA barcoding arthropod prey in bat faeces
- (2010) MATT R. K. ZEALE et al. Molecular Ecology Resources
- The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR Experiments
- (2009) S. A. Bustin et al. CLINICAL CHEMISTRY
- Species detection using environmental DNA from water samples
- (2008) G. F. Ficetola et al. Biology Letters
- A universal DNA mini-barcode for biodiversity analysis
- (2008) Isabelle Meusnier et al. BMC GENOMICS
- Comparative biodiversity of aquatic habitats in the European agricultural landscape
- (2007) Bella Davies et al. AGRICULTURE ECOSYSTEMS & ENVIRONMENT
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