Stable SNP Allele Associations With High Grain Zinc Content in Polished Rice (Oryza sativa L.) Identified Based on ddRAD Sequencing

Linkage disequilibrium mapping for grain Fe and Zn enhancing QTLs useful for nutrient dense rice breeding

(2020) S. K. Pradhan et al.   BMC PLANT BIOLOGY

Genome-Wide Association Mapping for Heat Stress Responsive Traits in Field Pea

(2020) Endale G. Tafesse et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genome-Wide Association Study Reveals Novel Marker-Trait Associations (MTAs) Governing the Localization of Fe and Zn in the Rice Grain

(2020) Haritha Bollinedi et al.   Frontiers in Genetics

Stability and G × E analysis of zinc-biofortified rice genotypes evaluated in diverse environments

(2019) Mary Ann Inabangan-Asilo et al.   EUPHYTICA

Salt Tolerance Improvement in Rice through Efficient SNP Marker-Assisted Selection Coupled with Speed-Breeding

(2019) Md Masud Rana et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Genetic Biofortification to Enrich Rice and Wheat Grain Iron: From Genes to Product

(2019) Yvonne Ludwig et al.   Frontiers in Plant Science

Meta-analysis of grain iron and zinc associated QTLs identified hotspot chromosomal regions and positional candidate genes for breeding biofortified rice

(2019) Qasim Raza et al.   PLANT SCIENCE

Genetic architecture of subspecies divergence in trace mineral accumulation and elemental correlations in the rice grain

(2019) Yongjun Tan et al.   THEORETICAL AND APPLIED GENETICS

Genome-Wide Association Mapping for Agronomic and Seed Quality Traits of Field Pea (Pisum sativum L.)

(2019) Krishna Kishore Gali et al.   Frontiers in Plant Science

Rice Biofortification: High Iron, Zinc, and Vitamin-A to Fight against “Hidden Hunger”

(2019) Shuvobrata Majumder et al.   Agronomy-Basel

ddRAD sequencing-based identification of inter-genepool SNPs and association analysis in Brassica juncea

(2019) Jebi Sudan et al.   BMC PLANT BIOLOGY

Transporter genes identified in landraces associated with high zinc in polished rice through panicle transcriptome for biofortification

(2018) C. N. Neeraja et al.   PLoS One

Pusa Basmati 1121 – a rice variety with exceptional kernel elongation and volume expansion after cooking

(2018) Vijaipal Singh et al.   Rice

Exploiting the Genomic Diversity of Rice (Oryza sativa L.): SNP-Typing in 11 Early-Backcross Introgression-Breeding Populations

(2018) Jauhar Ali et al.   Frontiers in Plant Science

Joint Exploration of Favorable Haplotypes for Mineral Concentrations in Milled Grains of Rice (Oryza sativa L.)

(2018) Guo-Min Zhang et al.   Frontiers in Plant Science

Genome-Wide Association Mapping in a Rice MAGIC Plus Population Detects QTLs and Genes Useful for Biofortification

(2018) Gwen Iris L. Descalsota et al.   Frontiers in Plant Science

Genotype by environment interactions in forest tree breeding: review of methodology and perspectives on research and application

(2017) Yongjun Li et al.   Tree Genetics & Genomes

Adapting Genotyping-by-Sequencing for Rice F2 Populations

(2017) Tomoyuki Furuta et al.   G3-Genes Genomes Genetics

Variation in mineral elements in grains of 20 brown rice accessions in two environments

(2016) Yan Huang et al.   FOOD CHEMISTRY

Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants

(2016) Guo-Qian Yang et al.   Plant Methods

Molecular Dissection of Seedling Salinity Tolerance in Rice (Oryza sativa L.) Using a High-Density GBS-Based SNP Linkage Map

(2016) Teresa B. De Leon et al.   Rice

Advances in breeding for high grain Zinc in Rice

(2016) B. P. Mallikarjuna Swamy et al.   Rice

Genotype × Environment Interactions of Yield Traits in Backcross Introgression Lines Derived from Oryza sativa cv. Swarna/Oryza nivara

(2016) Divya Balakrishnan et al.   Frontiers in Plant Science

Rice grain nutritional traits and their enhancement using relevant genes and QTLs through advanced approaches

(2016) Anumalla Mahender et al.   SpringerPlus

Genome-wide Association Mapping of Quantitative Trait Loci (QTLs) for Contents of Eight Elements in Brown Rice (Oryza sativa L.)

(2015) Zarqa Nawaz et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Variation of grain nutritional quality among Thai purple rice genotypes grown at two different altitudes

(2015) Benjavan Rerkasem et al.   SCIENCEASIA

Analysis of Population Structure and Genetic Diversity in Rice Germplasm Using SSR Markers: An Initiative Towards Association Mapping of Agronomic Traits in Oryza Sativa

(2015) Vishnu Varthini Nachimuthu et al.   Rice

Genome Wide Association Mapping of Grain Arsenic, Copper, Molybdenum and Zinc in Rice (Oryza sativa L.) Grown at Four International Field Sites

(2014) Gareth J. Norton et al.   PLoS One

Mapping and validation of quantitative trait loci associated with concentrations of 16 elements in unmilled rice grain

(2013) Min Zhang et al.   THEORETICAL AND APPLIED GENETICS

The statistical analysis of multi-environment data: modeling genotype-by-environment interaction and its genetic basis

(2013) Marcos Malosetti et al.   Frontiers in Physiology

GAPIT: genome association and prediction integrated tool

(2012) Alexander E. Lipka et al.   BIOINFORMATICS

Mapping QTLs and candidate genes for iron and zinc concentrations in unpolished rice of Madhukar×Swarna RILs

(2012) K. Anuradha et al.   GENE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

Shrinkage Estimation of the Realized Relationship Matrix

(2012) Jeffrey B. Endelman et al.   G3-Genes Genomes Genetics

Improving zinc bioavailability in transition from flooded to aerobic rice. A review

(2011) Xiaopeng Gao et al.   Agronomy for Sustainable Development

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

Developing Rice with High Yield under Phosphorus Deficiency: Pup1 Sequence to Application

(2011) J. H. Chin et al.   PLANT PHYSIOLOGY

Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa

(2011) Keyan Zhao et al.   Nature Communications

Genotype × Environment Interaction for Iron Concentration of Rice in Central Java of Indonesia

(2011) Suwarto et al.   Rice Science

Effects of Different Nitrogen Fertilizer Levels and Native Soil Properties on Rice Grain Fe, Zn and Protein Contents

(2010) G. CHANDEL et al.   Rice Science

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Quantitative trait loci controlling Cu, Ca, Zn, Mn and Fe content in rice grains

(2009) Kaiyang Lu et al.   JOURNAL OF GENETICS

Genetic mapping of the rice ionome in leaves and grain: identification of QTLs for 17 elements including arsenic, cadmium, iron and selenium

(2009) Gareth J. Norton et al.   PLANT AND SOIL

Global impacts of human mineral malnutrition

(2009) Alexander J. Stein   PLANT AND SOIL

Rice caryopsis structure in relation to distribution of micronutrients (iron, zinc, β-carotene) of rice cultivars including transgenic indica rice

(2009) Krishnan Sellappan et al.   PLANT SCIENCE

Development of submergence-tolerant rice cultivars: the Sub1 locus and beyond

(2008) Endang M. Septiningsih et al.   ANNALS OF BOTANY

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One