Cryo-Electron Tomography Reveals the Complex Ultrastructural Organization of Multicellular Filamentous Chloroflexota (Chloroflexi) Bacteria

Multidomain ribosomal protein trees and the planctobacterial origin of neomura (eukaryotes, archaebacteria)

(2020) Thomas Cavalier-Smith et al.   PROTOPLASMA

‘Candidatus Viridilinea mediisalina’, a novel phototrophic Chloroflexi bacterium from a Siberian soda lake

(2019) Vasil A Gaisin et al.   FEMS MICROBIOLOGY LETTERS

In situ and high‐resolution cryo‐EM structure of a bacterial type VI secretion system membrane complex

(2019) Chiara Rapisarda et al.   EMBO JOURNAL

AnnoTree: visualization and exploration of a functionally annotated microbial tree of life

(2019) Kerrin Mendler et al.   NUCLEIC ACIDS RESEARCH

Structure and Function of a Bacterial Gap Junction Analog

(2019) Gregor L. Weiss et al.   CELL

GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database

(2019) Pierre-Alain Chaumeil et al.   BIOINFORMATICS

Real-time cryo-electron microscopy data preprocessing with Warp

(2019) Dimitry Tegunov et al.   NATURE METHODS

Diversity of Chlorophototrophic Bacteria Revealed in the Omics Era

(2018) Vera Thiel et al.   Annual Review of Plant Biology

The cell wall of the filamentous anoxygenic phototrophic bacterium Oscillochloris trichoides

(2018) Olga I. Keppen et al.   MICROBIOLOGY-SGM

Robust workflow and instrumentation for cryo-focused ion beam milling of samples for electron cryotomography

(2018) João M. Medeiros et al.   ULTRAMICROSCOPY

Evolution of Phototrophy in the Chloroflexi Phylum Driven by Horizontal Gene Transfer

(2018) Lewis M. Ward et al.   Frontiers in Microbiology

Visualizing Individual RuBisCO and Its Assembly into Carboxysomes in Marine Cyanobacteria by Cryo-Electron Tomography

(2018) Wei Dai et al.   JOURNAL OF MOLECULAR BIOLOGY

Draft genome sequences of ‘Candidatus Chloroploca asiatica’ and ‘Candidatus Viridilinea mediisalina’, candidate representatives of the Chloroflexales order: phylogenetic and taxonomic implications

(2018) Denis S. Grouzdev et al.   Standards in Genomic Sciences

Chloroflexus islandicus sp. nov., a thermophilic filamentous anoxygenic phototrophic bacterium from a geyser

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

UFBoot2: Improving the Ultrafast Bootstrap Approximation

(2017) Diep Thi Hoang et al.   MOLECULAR BIOLOGY AND EVOLUTION

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

Evolution of the 3-hydroxypropionate bicycle and recent transfer of anoxygenic photosynthesis into the Chloroflexi

(2017) Patrick M. Shih et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Polyphosphate granule biogenesis is temporally and functionally tied to cell cycle exit during starvation inPseudomonas aeruginosa

(2017) Lisa R. Racki et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Obstruction of pilus retraction stimulates bacterial surface sensing

(2017) Courtney K. Ellison et al.   SCIENCE

Structure of the hexagonal surface layer on Caulobacter crescentus cells

(2017) Tanmay A. M. Bharat et al.   Nature Microbiology

Molecular genetic and physical analysis of gas vesicles in buoyant enterobacteria

(2016) Yosuke Tashiro et al.   ENVIRONMENTAL MICROBIOLOGY

Cryo-Electron Tomography: Can it Reveal the Molecular Sociology of Cells in Atomic Detail?

(2016) Martin Beck et al.   TRENDS IN CELL BIOLOGY

Phylogenomic analysis supports the ancestral presence of LPS-outer membranes in the Firmicutes

(2016) Luisa CS Antunes et al.   eLife

Filamentous anoxygenic phototrophic bacteria from cyanobacterial mats of Alla hot springs (Barguzin Valley, Russia)

(2015) Vasil A. Gaisin et al.   EXTREMOPHILES

Evidence that a modified type IV pilus-like system powers gliding motility and polysaccharide secretion in filamentous cyanobacteria

(2015) Behzad Khayatan et al.   MOLECULAR MICROBIOLOGY

Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms

(2015) Young-Mo Kim et al.   Frontiers in Microbiology

The ultrastructure of Chlorobaculum tepidum revealed by cryo-electron tomography

(2014) Misha Kudryashev et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Candidatus ‘Chloroploca asiatica’ gen. nov., sp. nov., a new mesophilic filamentous anoxygenic phototrophic bacterium

(2014) V. M. Gorlenko et al.   MICROBIOLOGY

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Temporal metatranscriptomic patterning in phototrophic Chloroflexi inhabiting a microbial mat in a geothermal spring

(2013) Christian G Klatt et al.   ISME Journal

Architecture and assembly of the Gram-positive cell wall

(2013) Morgan Beeby et al.   MOLECULAR MICROBIOLOGY

Peptidoglycan transformations duringBacillus subtilissporulation

(2013) Elitza I. Tocheva et al.   MOLECULAR MICROBIOLOGY

Chlorosome antenna complexes from green photosynthetic bacteria

(2013) Gregory S. Orf et al.   PHOTOSYNTHESIS RESEARCH

Pseudomonas aeruginosaTwitching Motility: Type IV Pili in Action

(2012) Lori L. Burrows   Annual Review of Microbiology

Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees

(2012) Maureen Stolzer et al.   BIOINFORMATICS

β-Barrel Membrane Protein Assembly by the Bam Complex

(2011) Christine L. Hagan et al.   Annual Review of Biochemistry

Peptidoglycan Remodeling and Conversion of an Inner Membrane into an Outer Membrane during Sporulation

(2011) Elitza I. Tocheva et al.   CELL

Outer membrane continuity and septosome formation between vegetative cells in the filaments of Anabaena sp. PCC 7120

(2011) Laura Wilk et al.   CELLULAR MICROBIOLOGY

Growth and Localization of Polyhydroxybutyrate Granules in Ralstonia eutropha

(2011) M. Beeby et al.   JOURNAL OF BACTERIOLOGY

Polyphosphate - an ancient energy source and active metabolic regulator

(2011) Lucia Achbergerová et al.   Microbial Cell Factories

Cell envelope architecture in the Chloroflexi: a shifting frontline in a phylogenetic turf war

(2010) Iain C. Sutcliffe   ENVIRONMENTAL MICROBIOLOGY

Cultivation and Genomic, Nutritional, and Lipid Biomarker Characterization of Roseiflexus Strains Closely Related to Predominant In Situ Populations Inhabiting Yellowstone Hot Spring Microbial Mats

(2010) M. T. J. van der Meer et al.   JOURNAL OF BACTERIOLOGY

Fra proteins influencing filament integrity, diazotrophy and localization of septal protein SepJ in the heterocyst-forming cyanobacteriumAnabaenasp.

(2010) Victoria Merino-Puerto et al.   MOLECULAR MICROBIOLOGY

Origins and Diversification of a Complex Signal Transduction System in Prokaryotes

(2010) K. Wuichet et al.   Science Signaling

A phylum level perspective on bacterial cell envelope architecture

(2010) Iain C. Sutcliffe   TRENDS IN MICROBIOLOGY

Universal architecture of bacterial chemoreceptor arrays

(2009) A. Briegel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Alternating syn-anti bacteriochlorophylls form concentric helical nanotubes in chlorosomes

(2009) S. Ganapathy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mechanism of intercellular molecular exchange in heterocyst-forming cyanobacteria

(2008) Conrad W Mullineaux et al.   EMBO JOURNAL