Widespread conservation and lineage-specific diversification of genome-wide DNA methylation patterns across arthropods
出版年份 2020 全文链接
标题
Widespread conservation and lineage-specific diversification of genome-wide DNA methylation patterns across arthropods
作者
关键词
DNA methylation, Methylation, Arthropoda, Nucleosomes, Invertebrate genomics, Gene expression, Insects, Drosophila melanogaster
出版物
PLoS Genetics
Volume 16, Issue 6, Pages e1008864
出版商
Public Library of Science (PLoS)
发表日期
2020-06-26
DOI
10.1371/journal.pgen.1008864
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Evolutionary Persistence of DNA Methylation for Millions of Years after Ancient Loss of a De Novo Methyltransferase
- (2020) Sandra Catania et al. CELL
- Dnmt1 is essential for egg production and embryo viability in the large milkweed bug, Oncopeltus fasciatus
- (2019) Adam J. Bewick et al. Epigenetics & Chromatin
- DNA Methylation Patterns in the Social Spider, Stegodyphus dumicola
- (2019) Shenglin Liu et al. Genes
- Diversity of cytosine methylation across the fungal tree of life
- (2019) Adam J. Bewick et al. Nature Ecology & Evolution
- Capture of a functionally active methyl-CpG binding domain by an arthropod retrotransposon family
- (2019) Alex de Mendoza et al. GENOME RESEARCH
- Phylogenetic shifts in gene body methylation correlate with gene expression and reflect trait conservation
- (2019) Danelle K Seymour et al. MOLECULAR BIOLOGY AND EVOLUTION
- Convergent evolution of a vertebrate-like methylome in a marine sponge
- (2019) Alex de Mendoza et al. Nature Ecology & Evolution
- Evolutionary analysis indicates that DNA alkylation damage is a byproduct of cytosine DNA methyltransferase activity
- (2018) Silvana Rošić et al. NATURE GENETICS
- Pattern of DNA Methylation in Daphnia: Evolutionary Perspective
- (2018) Jouni Kvist et al. Genome Biology and Evolution
- Loss of Gene Body Methylation in Eutrema salsugineum Is Associated with Reduced Gene Expression
- (2018) Aline Muyle et al. MOLECULAR BIOLOGY AND EVOLUTION
- The methylome of the marbled crayfish links gene body methylation to stable expression of poorly accessible genes
- (2018) Fanny Gatzmann et al. Epigenetics & Chromatin
- Clustering of Drosophila housekeeping promoters facilitates their expression
- (2017) Marc Corrales et al. GENOME RESEARCH
- Pan-arthropod analysis reveals somatic piRNAs as an ancestral defence against transposable elements
- (2017) Samuel H. Lewis et al. Nature Ecology & Evolution
- DNA methylation in silkworm genome may provide insights into epigenetic regulation of response to Bombyx mori cypovirus infection
- (2017) Ping Wu et al. Scientific Reports
- Evolutionary Consequences of DNA Methylation in a Basal Metazoan
- (2016) Groves B. Dixon et al. MOLECULAR BIOLOGY AND EVOLUTION
- On the origin and evolutionary consequences of gene body DNA methylation
- (2016) Adam J. Bewick et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Reprogramming of cell fate: epigenetic memory and the erasure of memories past
- (2015) B. Nashun et al. EMBO JOURNAL
- Evolutionary Transition of Promoter and Gene Body DNA Methylation across Invertebrate–Vertebrate Boundary
- (2015) Thomas E. Keller et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation
- (2015) Tuncay Baubec et al. NATURE
- Parallel Epigenomic and Transcriptomic Responses to Viral Infection in Honey Bees (Apis mellifera)
- (2015) David A. Galbraith et al. PLoS Pathogens
- In vivo targeting of de novo DNA methylation by histone modifications in yeast and mouse
- (2015) Marco Morselli et al. eLife
- MCMC Methods for Multi-Response Generalized Linear Mixed Models: TheMCMCglmmRPackage
- (2015) Jarrod D. Hadfield Journal of Statistical Software
- InterProScan 5: genome-scale protein function classification
- (2014) P. Jones et al. BIOINFORMATICS
- Comparative analysis of metazoan chromatin organization
- (2014) Joshua W. K. Ho et al. NATURE
- Two independent transcription initiation codes overlap on vertebrate core promoters
- (2014) Vanja Haberle et al. NATURE
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- Phylogenomics resolves the timing and pattern of insect evolution
- (2014) B. Misof et al. SCIENCE
- Patterning and Regulatory Associations of DNA Methylation Are Mirrored by Histone Modifications in Insects
- (2013) Brendan G. Hunt et al. Genome Biology and Evolution
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Gene body methylation is conserved between plant orthologs and is of evolutionary consequence
- (2013) S. Takuno et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Function and Evolution of DNA Methylation in Nasonia vitripennis
- (2013) Xu Wang et al. PLoS Genetics
- TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
- (2013) Daehwan Kim et al. GENOME BIOLOGY
- Genome-wide and Caste-Specific DNA Methylomes of the Ants Camponotus floridanus and Harpegnathos saltator
- (2012) Roberto Bonasio et al. CURRENT BIOLOGY
- Characterization of genome methylation patterns in the desert locust Schistocerca gregaria
- (2012) C. Falckenhayn et al. JOURNAL OF EXPERIMENTAL BIOLOGY
- Bayesian Phylogenetics with BEAUti and the BEAST 1.7
- (2012) Alexei J. Drummond et al. MOLECULAR BIOLOGY AND EVOLUTION
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Metazoan promoters: emerging characteristics and insights into transcriptional regulation
- (2012) Boris Lenhard et al. NATURE REVIEWS GENETICS
- The KRAB-ZFP/KAP1 System Contributes to the Early Embryonic Establishment of Site-Specific DNA Methylation Patterns Maintained during Development
- (2012) Simon Quenneville et al. Cell Reports
- Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
- (2011) Felix Krueger et al. BIOINFORMATICS
- phytools: an R package for phylogenetic comparative biology (and other things)
- (2011) Liam J. Revell Methods in Ecology and Evolution
- Genome-wide analysis of promoter architecture in Drosophila melanogaster
- (2010) R. A. Hoskins et al. GENOME RESEARCH
- Relationship between nucleosome positioning and DNA methylation
- (2010) Ramakrishna K. Chodavarapu et al. NATURE
- Single base–resolution methylome of the silkworm reveals a sparse epigenomic map
- (2010) Hui Xiang et al. NATURE BIOTECHNOLOGY
- Establishing, maintaining and modifying DNA methylation patterns in plants and animals
- (2010) Julie A. Law et al. NATURE REVIEWS GENETICS
- Conservation and divergence of methylation patterning in plants and animals
- (2010) S. Feng et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structure of DNMT1-DNA Complex Reveals a Role for Autoinhibition in Maintenance DNA Methylation
- (2010) J. Song et al. SCIENCE
- Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation
- (2010) A. Zemach et al. SCIENCE
- The Honey Bee Epigenomes: Differential Methylation of Brain DNA in Queens and Workers
- (2010) Frank Lyko et al. PLOS BIOLOGY
- Nucleosome positioning as a determinant of exon recognition
- (2009) Hagen Tilgner et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Chromatin organization marks exon-intron structure
- (2009) Schraga Schwartz et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- DNA methylation landscapes: provocative insights from epigenomics
- (2008) Miho M. Suzuki et al. NATURE REVIEWS GENETICS
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