Dichotomous engagement of HDAC3 activity governs inflammatory responses

A Genome-wide Framework for Mapping Gene Regulation via Cellular Genetic Screens

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Diverse motif ensembles specify non-redundant DNA binding activities of AP-1 family members in macrophages

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The intestinal microbiota programs diurnal rhythms in host metabolism through histone deacetylase 3

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Electrophilic properties of itaconate and derivatives regulate the IκBζ–ATF3 inflammatory axis

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Histone deacetylase 3 prepares brown adipose tissue for acute thermogenic challenge

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Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

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ATF3 Inhibits Tenascin-C-induced Foam Cell Formation in LPS-Stimulated THP-1 Macrophages by Suppressing TLR-4

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Histone Deacetylase 3 Coordinates Deacetylase-independent Epigenetic Silencing of Transforming Growth Factor-β1 (TGF-β1) to Orchestrate Second Heart Field Development

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ATF3 Is a Key Regulator of Macrophage IFN Responses

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Ligand engagement of Toll-like receptors regulates their expression in cortical microglia and astrocytes

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HDAC Inhibitors as Novel Anti-Cancer Therapeutics

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Histone Deacetylases Positively Regulate Transcription through the Elongation Machinery

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Circadian Enhancers Coordinate Multiple Phases of Rhythmic Gene Transcription In Vivo

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featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

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Deacetylase-Independent Function of HDAC3 in Transcription and Metabolism Requires Nuclear Receptor Corepressor

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Remodeling of the Enhancer Landscape during Macrophage Activation Is Coupled to Enhancer Transcription

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Genome-wide profiling of in vivo LPS-responsive genes in splenic myeloid cells

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High-density lipoprotein mediates anti-inflammatory reprogramming of macrophages via the transcriptional regulator ATF3

(2013) Dominic De Nardo et al.   NATURE IMMUNOLOGY

Nuclear receptor co-repressors are required for the histone-deacetylase activity of HDAC3 in vivo

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STAR: ultrafast universal RNA-seq aligner

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Targeted cancer therapy: giving histone deacetylase inhibitors all they need to succeed

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Structure of HDAC3 bound to co-repressor and inositol tetraphosphate

(2012) Peter J. Watson et al.   NATURE

Fast gapped-read alignment with Bowtie 2

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The coactivator role of histone deacetylase 3 in IL-1-signaling involves deacetylation of p65 NF-κB

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Requirement for the histone deacetylase Hdac3 for the inflammatory gene expression program in macrophages

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Nuclear factor- B binding motifs specify Toll-like receptor-induced gene repression through an inducible repressosome

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Histone deacetylase 3 is an epigenomic brake in macrophage alternative activation

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Inhibitors of Histone Deacetylases

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Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA

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BEDTools: a flexible suite of utilities for comparing genomic features

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Histone deacetylase inhibitors impair innate immune responses to Toll-like receptor agonists and to infection

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Bcl-6 and NF- B cistromes mediate opposing regulation of the innate immune response

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Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities

(2010) Sven Heinz et al.   MOLECULAR CELL

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

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Therapeutic application of histone deacetylase inhibitors for central nervous system disorders

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