Development of a genetic toolset for the highly engineerable and metabolically versatile Acinetobacter baylyi ADP1

High-Resolution Mapping of the Escherichia coli Chromosome Reveals Positions of High and Low Transcription

(2019) Scott A. Scholz et al.   Cell Systems

Synthetic Genome Defenses against Selfish DNA Elements Stabilize Engineered Bacteria against Evolutionary Failure

(2019) Peng Geng et al.   ACS Synthetic Biology

Circular chemistry to enable a circular economy

(2019) Tom Keijer et al.   Nature Chemistry

Synthetic metabolic pathway for the production of 1-alkenes from lignin-derived molecules

(2019) Jin Luo et al.   Microbial Cell Factories

Removal of aromatic inhibitors produced from lignocellulosic hydrolysates by Acinetobacter baylyi ADP1 with formation of ethanol by Kluyveromyces marxianus

(2019) Anita Singh et al.   Biotechnology for Biofuels

Building a global alliance of biofoundries

(2019) Nathan Hillson et al.   Nature Communications

Chemicals from lignin: an interplay of lignocellulose fractionation, depolymerisation, and upgrading

(2018) W. Schutyser et al.   CHEMICAL SOCIETY REVIEWS

Genetic tools for reliable gene expression and recombineering in Pseudomonas putida

(2018) Taylor B. Cook et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Improved fatty aldehyde and wax ester production by overexpression of fatty acyl-CoA reductases

(2018) Tapio Lehtinen et al.   Microbial Cell Factories

Accelerating pathway evolution by increasing the gene dosage of chromosomal segments

(2018) Melissa Tumen-Velasquez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular Toolkit for Gene Expression Control and Genome Modification in Rhodococcus opacus PD630

(2018) Drew M. DeLorenzo et al.   ACS Synthetic Biology

Construction and Characterization of Broad-Spectrum Promoters for Synthetic Biology

(2017) Sen Yang et al.   ACS Synthetic Biology

Opportunities and challenges in biological lignin valorization

(2016) Gregg T Beckham et al.   CURRENT OPINION IN BIOTECHNOLOGY

From dirt to industrial applications: Pseudomonas putida as a Synthetic Biology chassis for hosting harsh biochemical reactions

(2016) Pablo I Nikel et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

Vibrio natriegens as a fast-growing host for molecular biology

(2016) Matthew T Weinstock et al.   NATURE METHODS

Effect of Genome Position on Heterologous Gene Expression in Bacillus subtilis: An Unbiased Analysis

(2016) Christopher Sauer et al.   ACS Synthetic Biology

Gas Fermentation—A Flexible Platform for Commercial Scale Production of Low-Carbon-Fuels and Chemicals from Waste and Renewable Feedstocks

(2016) FungMin Liew et al.   Frontiers in Microbiology

Towards lignin consolidated bioprocessing: simultaneous lignin depolymerization and product generation by bacteria

(2015) Davinia Salvachúa et al.   GREEN CHEMISTRY

Rational design of a synthetic Entner–Doudoroff pathway for improved and controllable NADPH regeneration

(2015) Chiam Yu Ng et al.   METABOLIC ENGINEERING

Cloning Should Be Simple: Escherichia coli DH5α-Mediated Assembly of Multiple DNA Fragments with Short End Homologies

(2015) Maxim Kostylev et al.   PLoS One

Multivariate modular metabolic engineering for pathway and strain optimization

(2014) Bradley Walters Biggs et al.   CURRENT OPINION IN BIOTECHNOLOGY

Novel metabolic features in Acinetobacter baylyi ADP1 revealed by a multiomics approach

(2014) Lucille Stuani et al.   Metabolomics

Chromosome position effects on gene expression in Escherichia coli K-12

(2014) Jack A. Bryant et al.   NUCLEIC ACIDS RESEARCH

Lignin valorization through integrated biological funneling and chemical catalysis

(2014) J. G. Linger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The DNA-binding domain of BenM reveals the structural basis for the recognition of a T-N11-A sequence motif by LysR-type transcriptional regulators

(2013) Amer M. Alanazi et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Characterization of 582 natural and synthetic terminators and quantification of their design constraints

(2013) Ying-Ja Chen et al.   NATURE METHODS

Precise and reliable gene expression via standard transcription and translation initiation elements

(2013) Vivek K Mutalik et al.   NATURE METHODS

Expression Vectors for Acinetobacter baylyi ADP1

(2011) Charles Daniel Murin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fundamentals of green chemistry: efficiency in reaction design

(2011) Roger A. Sheldon   CHEMICAL SOCIETY REVIEWS

Acinetobacter baylyi ADP1: Transforming the choice of model organism

(2011) Kathryn T. Elliott et al.   IUBMB LIFE

Improved Triacylglycerol Production in Acinetobacter baylyi ADP1 by Metabolic Engineering

(2011) Suvi Santala et al.   Microbial Cell Factories

Genome-wide selection for increased copy number in Acinetobacter baylyi ADP1: locus and context-dependent variation in gene amplification

(2011) Sarah C. Seaton et al.   MOLECULAR MICROBIOLOGY

The  -ketoadipate pathway of Acinetobacter baylyi undergoes carbon catabolite repression, cross-regulation and vertical regulation, and is affected by Crc

(2010) F. S. Bleichrodt et al.   MICROBIOLOGY-SGM

Rational Design of a Plasmid Origin That Replicates Efficiently in Both Gram-Positive and Gram-Negative Bacteria

(2010) Anton V. Bryksin et al.   PLoS One

Clostridium ljungdahlii represents a microbial production platform based on syngas

(2010) M. Kopke et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Acinetobacter baylyi ADP1 as a model for metabolic system biology

(2009) Véronique de Berardinis et al.   CURRENT OPINION IN MICROBIOLOGY

Stabilized gene duplication enables long-term selection-free heterologous pathway expression

(2009) Keith E J Tyo et al.   NATURE BIOTECHNOLOGY

Synthetic Biology for Synthetic Chemistry

(2008) Jay D. Keasling   ACS Chemical Biology

A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1

(2008) Véronique de Berardinis et al.   Molecular Systems Biology