标题
GPSeq reveals the radial organization of chromatin in the cell nucleus
作者
关键词
-
出版物
NATURE BIOTECHNOLOGY
Volume -, Issue -, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2020-05-26
DOI
10.1038/s41587-020-0519-y
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Local Determinants of the Mutational Landscape of the Human Genome
- (2019) Abel Gonzalez-Perez et al. CELL
- Spatial Chromosome Folding and Active Transcription Drive DNA Fragility and Formation of Oncogenic MLL Translocations
- (2019) Henrike Johanna Gothe et al. MOLECULAR CELL
- iFISH is a publically available resource enabling versatile DNA FISH to study genome architecture
- (2019) Eleni Gelali et al. Nature Communications
- Snakemake—a scalable bioinformatics workflow engine
- (2018) Johannes Köster et al. BIOINFORMATICS
- Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus
- (2018) Sofia A. Quinodoz et al. CELL
- Producing genome structure populations with the dynamic and automated PGS software
- (2018) Nan Hua et al. Nature Protocols
- Mapping 3D genome organization relative to nuclear compartments using TSA-Seq as a cytological ruler
- (2018) Yu Chen et al. JOURNAL OF CELL BIOLOGY
- Transcription-driven genome organization: a model for chromosome structure and the regulation of gene expression tested through simulations
- (2018) Peter R Cook et al. NUCLEIC ACIDS RESEARCH
- Three-dimensional genome structures of single diploid human cells
- (2018) Longzhi Tan et al. SCIENCE
- Causes and consequences of nuclear gene positioning
- (2017) Sigal Shachar et al. JOURNAL OF CELL SCIENCE
- Complex multi-enhancer contacts captured by genome architecture mapping
- (2017) Robert A. Beagrie et al. NATURE
- TumorFusions: an integrative resource for cancer-associated transcript fusions
- (2017) Xin Hu et al. NUCLEIC ACIDS RESEARCH
- ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing
- (2016) Xingqi Chen et al. NATURE METHODS
- DSBCapture: in situ capture and sequencing of DNA breaks
- (2016) Stefanie V Lensing et al. NATURE METHODS
- The international Genome sample resource (IGSR): A worldwide collection of genome variation incorporating the 1000 Genomes Project data
- (2016) Laura Clarke et al. NUCLEIC ACIDS RESEARCH
- Population-based 3D genome structure analysis reveals driving forces in spatial genome organization
- (2016) Harianto Tjong et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The topography of mutational processes in breast cancer genomes
- (2016) Sandro Morganella et al. Nature Communications
- Genome-wide Maps of Nuclear Lamina Interactions in Single Human Cells
- (2015) Jop Kind et al. CELL
- A modified ziggurat algorithm for generating exponentially and normally distributed pseudorandom numbers
- (2015) Christopher D. McFarland JOURNAL OF STATISTICAL COMPUTATION AND SIMULATION
- Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes
- (2015) Adrian L. Sanborn et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
- (2014) Suhas S.P. Rao et al. CELL
- Nuclear bodies: new insights into assembly/dynamics and disease relevance
- (2014) Judith E Sleeman et al. CURRENT OPINION IN CELL BIOLOGY
- Chromosome positioning from activity-based segregation
- (2014) Nirmalendu Ganai et al. NUCLEIC ACIDS RESEARCH
- Chromatin decondensation is sufficient to alter nuclear organization in embryonic stem cells
- (2014) Pierre Therizols et al. SCIENCE
- Single-cell Hi-C reveals cell-to-cell variability in chromosome structure
- (2013) Takashi Nagano et al. NATURE
- Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
- (2013) Jason D Buenrostro et al. NATURE METHODS
- Differential Relationship of DNA Replication Timing to Different Forms of Human Mutation and Variation
- (2012) Amnon Koren et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Chromatin organization is a major influence on regional mutation rates in human cancer cells
- (2012) Benjamin Schuster-Böckler et al. NATURE
- Genome-wide Translocation Sequencing Reveals Mechanisms of Chromosome Breaks and Rearrangements in B Cells
- (2011) Roberto Chiarle et al. CELL
- Genome architectures revealed by tethered chromosome conformation capture and population-based modeling
- (2011) Reza Kalhor et al. NATURE BIOTECHNOLOGY
- Genome organization in and around the nucleolus
- (2011) Attila Németh et al. TRENDS IN GENETICS
- Molecular Maps of the Reorganization of Genome-Nuclear Lamina Interactions during Differentiation
- (2010) Daan Peric-Hupkes et al. MOLECULAR CELL
- Human mutation rate associated with DNA replication timing
- (2009) John A Stamatoyannopoulos et al. NATURE GENETICS
- Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome
- (2009) E. Lieberman-Aiden et al. SCIENCE
- The Meaning of Gene Positioning
- (2008) Takumi Takizawa et al. CELL
- Three-dimensional positioning of genes in mouse cell nuclei
- (2008) Claudia Hepperger et al. CHROMOSOMA
- Replication-timing-correlated spatial chromatin arrangements in cancer and in primate interphase nuclei
- (2008) F. Grasser et al. JOURNAL OF CELL SCIENCE
- Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions
- (2008) Lars Guelen et al. NATURE
- Transcriptional repression mediated by repositioning of genes to the nuclear lamina
- (2008) K. L. Reddy et al. NATURE
- Recruitment to the Nuclear Periphery Can Alter Expression of Genes in Human Cells
- (2008) Lee E. Finlan et al. PLoS Genetics
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