Linking signaling pathways to histone acetylation dynamics in plants

HY5-HDA9 Module Transcriptionally Regulates Plant Autophagy in Response to Light-to-Dark Conversion and Nitrogen Starvation

(2020) Chao Yang et al.   Molecular Plant

Chimeric Activators and Repressors Define HY5 Activity and Reveal a Light-Regulated Feedback Mechanism

(2020) Yogev Burko et al.   PLANT CELL

Enhanced sustainable green revolution yield via nitrogen-responsive chromatin modulation in rice

(2020) Kun Wu et al.   SCIENCE

Histone Deacetylase HDA9 With ABI4 Contributes to Abscisic Acid Homeostasis in Drought Stress Response

(2020) Dongwon Baek et al.   Frontiers in Plant Science

HOS15 interacts with the histone deactetylase HDA9 and the Evening Complex to epigenetically regulate the floral activator GIGANTEA

(2019) Hee Jin Park et al.   PLANT CELL

The LDL1/2-HDA6 Histone Modification Complex Interacts With TOC1 and Regulates the Core Circadian Clock Components in Arabidopsis

(2019) Fu-Yu Hung et al.   Frontiers in Plant Science

HDA9-PWR-HOS15 is a core histone deacetylase complex regulating transcription and development

(2019) Kevin S Mayer et al.   PLANT PHYSIOLOGY

The HDA19 histone deacetylase complex is involved in the regulation of flowering time in a photoperiod-dependent manner

(2019) Yong-Qiang Ning et al.   PLANT JOURNAL

GCN5 modulates trichome initiation in Arabidopsis by manipulating histone acetylation of core trichome initiation regulator genes

(2019) Tianya Wang et al.   PLANT CELL REPORTS

HY5 Interacts with the Histone Deacetylase HDA15 to Repress Hypocotyl Cell Elongation in Photomorphogenesis

(2019) Linmao Zhao et al.   PLANT PHYSIOLOGY

WRKY18 and WRKY53 Coordinate with HISTONE ACETYLTRANSFERASE1 to Regulate Rapid Responses to Sugar

(2019) Qingshuai Chen et al.   PLANT PHYSIOLOGY

ABSCISIC ACID-INSENSITIVE 3 is involved in brassinosteroid-mediated regulation of flowering in plants

(2019) Jeongeui Hong et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Powerdress as the novel regulator enhances Arabidopsis seeds germination tolerance to high temperature stress by histone modification of SOM locus

(2019) Wenjuan Yang et al.   PLANT SCIENCE

Transcriptional network regulation of the brassinosteroid signaling pathway by the BES1–TPL–HDA19 co-repressor complex

(2019) Hyemin Kim et al.   PLANTA

MYB96 recruits the HDA15 protein to suppress negative regulators of ABA signaling in Arabidopsis

(2019) Hong Gil Lee et al.   Nature Communications

Histone acetyltransferase GCN5-mediated regulation of long non-coding RNA At4 contributes to phosphate starvation response in Arabidopsis

(2019) Tianya Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Rheostatic control of ABA signaling through HOS15-mediated OST1 degradation

(2019) Akhtar Ali et al.   Molecular Plant

Arabidopsis histone deacetylase HDA 15 directly represses plant response to elevated ambient temperature

(2019) Yuan Shen et al.   PLANT JOURNAL

Histone modifications form epigenetic regulatory networks to regulate abiotic stress response

(2019) Minoru Ueda et al.   PLANT PHYSIOLOGY

HISTONE DEACETYLASE 9 stimulates auxin-dependent thermomorphogenesis in Arabidopsis thaliana by mediating H2A.Z depletion

(2019) Lennard C. van der Woude et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

WUSCHEL acts as an auxin response rheostat to maintain apical stem cells in Arabidopsis

(2019) Yanfei Ma et al.   Nature Communications

Histone Deacetylase HDA9 and WRKY53 Transcription Factor Are Mutual Antagonists in Regulation of Plant Stress Response

(2019) Yu Zheng et al.   Molecular Plant

HOS15 and HDA9 negatively regulate immunity through histone deacetylation of intracellular immune receptor NLR genes in Arabidopsis

(2019) Leiyun Yang et al.   NEW PHYTOLOGIST

Functions and mechanisms of plant histone deacetylases

(2019) Xiangsong Chen et al.   Science China-Life Sciences

Brassinosteroid Signaling Recruits Histone 3 Lysine-27 Demethylation Activity to FLOWERING LOCUS C Chromatin to Inhibit the Floral Transition in Arabidopsis

(2018) Zicong Li et al.   Molecular Plant

Histone Deacetylases SRT1 and SRT2 Interact with ENAP1 to Mediate Ethylene-Induced Transcriptional Repression

(2018) Fan Zhang et al.   PLANT CELL

Canonical and Noncanonical Actions of Arabidopsis Histone Deacetylases in Ribosomal RNA Processing

(2018) Xiangsong Chen et al.   PLANT CELL

Epigenetic switch from repressive to permissive chromatin in response to cold stress

(2018) Junghoon Park et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

POWERDRESS-mediated histone deacetylation is essential for thermomorphogenesis in Arabidopsis thaliana

(2018) Celine Tasset et al.   PLoS Genetics

OLIGOCELLULA1/HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES15 Promotes Cell Proliferation With HISTONE DEACETYLASE9 and POWERDRESS During Leaf Development in Arabidopsis thaliana

(2018) Marina Suzuki et al.   Frontiers in Plant Science

Epigenetic reprogramming by histone acetyltransferase HAG1/AtGCN5 is required for pluripotency acquisition inArabidopsis

(2018) Ji‐Yun Kim et al.   EMBO JOURNAL

Histone deacetylases HDA6 and HDA9 coordinately regulate valve cell elongation through affecting auxin signaling in Arabidopsis

(2018) Liangbing Yuan et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Reversible Histone H2B Monoubiquitination Fine-tunes Abscisic Acid Signaling and Drought Response in Rice

(2018) Siqi Ma et al.   Molecular Plant

Histone Acetylation Cooperating with AREB1 Transcription Factor Regulates Drought Response and Tolerance in Populus trichocarpa

(2018) Shuang Li et al.   PLANT CELL

PlantEAR: Functional Analysis Platform for Plant EAR Motif-Containing Proteins

(2018) Jiaotong Yang et al.   Frontiers in Genetics

Arabidopsis NF-YCs Mediate the Light-Controlled Hypocotyl Elongation via Modulating Histone Acetylation

(2017) Yang Tang et al.   Molecular Plant

Histone Deacetylase AtSRT1 Links Metabolic Flux and Stress Response in Arabidopsis

(2017) Xiaoyun Liu et al.   Molecular Plant

Identification of HDA15-PIF1 as a key repression module directing the transcriptional network of seed germination in the dark

(2017) Dachuan Gu et al.   NUCLEIC ACIDS RESEARCH

Rice Homeodomain Protein WOX11 Recruits a Histone Acetyltransferase Complex to Establish Programs of Cell Proliferation of Crown Root Meristem

(2017) Shaoli Zhou et al.   PLANT CELL

Gibberellin Signaling Requires Chromatin Remodeler PICKLE to Promote Vegetative Growth and Phase Transitions

(2017) Jeongmoo Park et al.   PLANT PHYSIOLOGY

Linking PHYTOCHROME-INTERACTING FACTOR to Histone Modification in Plant Shade Avoidance

(2017) Maolin Peng et al.   PLANT PHYSIOLOGY

EIN2 mediates direct regulation of histone acetylation in the ethylene response

(2017) Fan Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HAC1 and HAF1 Histone Acetyltransferases Have Different Roles in UV-B Responses in Arabidopsis

(2017) Julieta P. Fina et al.   Frontiers in Plant Science

Mechanisms of auxin signaling

(2016) Meirav Lavy et al.   DEVELOPMENT

Histone deacetylase HDA9 negatively regulates salt and drought stress responsiveness in Arabidopsis

(2016) Yu Zheng et al.   JOURNAL OF EXPERIMENTAL BOTANY

Epigenetic Modifications and Plant Hormone Action

(2016) Chizuko Yamamuro et al.   Molecular Plant

HD2C histone deacetylase and a SWI/SNF chromatin remodelling complex interact and both are involved in mediating the heat stress response inArabidopsis

(2016) Daniel Buszewicz et al.   PLANT CELL AND ENVIRONMENT

POWERDRESS and HDA9 interact and promote histone H3 deacetylation at specific genomic sites inArabidopsis

(2016) Yun Ju Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

EIN2-dependent regulation of acetylation of histone H3K14 and non-canonical histone H3K23 in ethylene signalling

(2016) Fan Zhang et al.   Nature Communications

POWERDRESS interacts with HISTONE DEACETYLASE 9 to promote aging in Arabidopsis

(2016) Xiangsong Chen et al.   eLife

AtHD2D Gene Plays a Role in Plant Growth, Development, and Response to Abiotic Stresses in Arabidopsis thaliana

(2016) Zhaofen Han et al.   Frontiers in Plant Science

Organizer-Derived WOX5 Signal Maintains Root Columella Stem Cells through Chromatin-Mediated Repression of CDF4 Expression

(2015) Limin Pi et al.   DEVELOPMENTAL CELL

Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses inArabidopsis thaliana

(2015) Stylianos Poulios et al.   JOURNAL OF EXPERIMENTAL BOTANY

HAG3, a Histone Acetyltransferase, Affects UV-B Responses by Negatively Regulating the Expression of DNA Repair Enzymes and Sunscreen Content inArabidopsis thaliana

(2015) Julieta P. Fina et al.   PLANT AND CELL PHYSIOLOGY

Strigolactone Signaling in Arabidopsis Regulates Shoot Development by Targeting D53-Like SMXL Repressor Proteins for Ubiquitination and Degradation

(2015) Lei Wang et al.   PLANT CELL

Histone acetyltransferase GCN5 is essential for heat stress-responsive gene activation and thermotolerance in Arabidopsis

(2015) Zhaorong Hu et al.   PLANT JOURNAL

Structural basis for recognition of diverse transcriptional repressors by the TOPLESS family of corepressors

(2015) J. Ke et al.   Science Advances

Histone Acetyltransferases in Plant Development and Plasticity

(2014) Irina Boycheva et al.   CURRENT GENOMICS

Transcriptional Repression by Histone Deacetylases in Plants

(2014) Xuncheng Liu et al.   Molecular Plant

Repression of flowering under a noninductive photoperiod by theHDA9-AGL19-FTmodule in Arabidopsis

(2014) Min-Jeong Kang et al.   NEW PHYTOLOGIST

Environmental History Modulates Arabidopsis Pattern-Triggered Immunity in a HISTONE ACETYLTRANSFERASE1-Dependent Manner

(2014) P. Singh et al.   PLANT CELL

The Arabidopsis Class II Sirtuin Is a Lysine Deacetylase and Interacts with Mitochondrial Energy Metabolism

(2014) A.-C. Konig et al.   PLANT PHYSIOLOGY

The Arabidopsis transcription factor bZIP11 activates auxin-mediated transcription by recruiting the histone acetylation machinery

(2014) Christoph Weiste et al.   Nature Communications

Control of early seedling development by BES1/TPL/HDA19-mediated epigenetic regulation of ABI3

(2014) Hojin Ryu et al.   Nature Communications

TOPLESS mediates brassinosteroid-induced transcriptional repression through interaction with BZR1

(2014) Eunkyoo Oh et al.   Nature Communications

Involvement of Arabidopsis Histone Acetyltransferase HAC Family Genes in the Ethylene Signaling Pathway

(2013) Chao Li et al.   PLANT AND CELL PHYSIOLOGY

PHYTOCHROME INTERACTING FACTOR3 Associates with the Histone Deacetylase HDA15 in Repression of Chlorophyll Biosynthesis and Photosynthesis in Etiolated Arabidopsis Seedlings

(2013) X. Liu et al.   PLANT CELL

Dynamics and biological relevance of DNA demethylation in Arabidopsis antibacterial defense

(2013) A. Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

APETALA2 negatively regulates multiple floral organ identity genes in Arabidopsis by recruiting the co-repressor TOPLESS and the histone deacetylase HDA19

(2012) N. T. Krogan et al.   DEVELOPMENT

HD2C interacts with HDA6 and is involved in ABA and salt stress response in Arabidopsis

(2012) Ming Luo et al.   JOURNAL OF EXPERIMENTAL BOTANY

JAZ8 Lacks a Canonical Degron and Has an EAR Motif That Mediates Transcriptional Repression of Jasmonate Responses in Arabidopsis

(2012) C. Shyu et al.   PLANT CELL

HDA19 is required for the repression of salicylic acid biosynthesis and salicylic acid-mediated defense responses in Arabidopsis

(2012) Sun-Mee Choi et al.   PLANT JOURNAL

Subcellular Localization of Class II HDAs in Arabidopsis thaliana: Nucleocytoplasmic Shuttling of HDA15 Is Driven by Light

(2012) Malona V. Alinsug et al.   PLoS One

Widespread dynamic DNA methylation in response to biotic stress

(2012) R. H. Dowen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Transcriptional corepressor TOPLESS complexes with pseudoresponse regulator proteins and histone deacetylases to regulate circadian transcription

(2012) L. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Signals and Combinatorial Functions of Histone Modifications

(2011) Tamaki Suganuma et al.   Annual Review of Biochemistry

EAR motif-mediated transcriptional repression in plants

(2011) Sateesh Kagale et al.   Epigenetics

Participation of Chromatin-Remodeling Proteins in the Repair of Ultraviolet-B-Damaged DNA

(2011) M. Campi et al.   PLANT PHYSIOLOGY

The TOPLESS Interactome: A Framework for Gene Repression in Arabidopsis

(2011) B. Causier et al.   PLANT PHYSIOLOGY

Arabidopsis WRKY46 coordinates with WRKY70 and WRKY53 in basal resistance against pathogen Pseudomonas syringae

(2011) Yanru Hu et al.   PLANT SCIENCE

Derepression of ethylene-stabilized transcription factors (EIN3/EIL1) mediates jasmonate and ethylene signaling synergy in Arabidopsis

(2011) Z. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mutator transposon activation after UV-B involves chromatin remodeling

(2010) Julia I. Qüesta et al.   Epigenetics

Histone Acetyltransferase AtGCN5/HAG1 Is a Versatile Regulator of Developmental and Inducible Gene Expression in Arabidopsis

(2010) Caroline Servet et al.   Molecular Plant

NINJA connects the co-repressor TOPLESS to jasmonate signalling

(2010) Laurens Pauwels et al.   NATURE

Epigenetic modifications and human disease

(2010) Anna Portela et al.   NATURE BIOTECHNOLOGY

Arabidopsis Putative Deacetylase AtSRT2 Regulates Basal Defense by Suppressing PAD4, EDS5 and SID2 Expression

(2010) Chunzheng Wang et al.   PLANT AND CELL PHYSIOLOGY

Histone dynamics and roles of histone acetyltransferases during cold-induced gene regulation in Arabidopsis

(2010) Kanchan Pavangadkar et al.   PLANT MOLECULAR BIOLOGY

Genome-Wide Analysis of Ethylene-Responsive Element Binding Factor-Associated Amphiphilic Repression Motif-Containing Transcriptional Regulators in Arabidopsis

(2010) S. Kagale et al.   PLANT PHYSIOLOGY

Putative Arabidopsis Transcriptional Adaptor Protein (PROPORZ1) is required to modulate histone acetylation in response to auxin

(2010) J. M. Anzola et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arabidopsis resistance protein SNC1 activates immune responses through association with a transcriptional corepressor

(2010) Z. Zhu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Epigenetic regulation of stress responses in plants

(2009) Viswanathan Chinnusamy et al.   CURRENT OPINION IN PLANT BIOLOGY

The MYST histone acetyltransferases are essential for gametophyte development in Arabidopsis

(2008) David Latrasse et al.   BMC PLANT BIOLOGY

Arabidopsis WRKY38 and WRKY62 Transcription Factors Interact with Histone Deacetylase 19 in Basal Defense

(2008) K.-C. Kim et al.   PLANT CELL

Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5

(2008) Moussa Benhamed et al.   PLANT JOURNAL

TOPLESS Mediates Auxin-Dependent Transcriptional Repression During Arabidopsis Embryogenesis

(2008) H. Szemenyei et al.   SCIENCE