A structural perspective of RNA recognition by intrinsically disordered proteins

The new (dis)order in RNA regulation

(2016) Aino I. Järvelin et al.   Cell Communication and Signaling

Roles of RNA-Binding Proteins in DNA Damage Response

(2016) Mihoko Kai   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Proteomic and bioinformatic analysis of a nuclear intrinsically disordered proteome

(2016) Bozena Skupien-Rabian et al.   Journal of Proteomics

Disordered nucleiome: Abundance of intrinsic disorder in the DNA- and RNA-binding proteins in 1121 species from Eukaryota, Bacteria and Archaea

(2016) Chen Wang et al.   PROTEOMICS

Deciphering the protein-RNA recognition code: Combining large-scale quantitative methods with structural biology

(2015) Janosch Hennig et al.   BIOESSAYS

Molecular architecture of protein-RNA recognition sites

(2015) Amita Barik et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Emerging Roles of Disordered Sequences in RNA-Binding Proteins

(2015) Sara Calabretta et al.   TRENDS IN BIOCHEMICAL SCIENCES

Functional Advantages of Conserved Intrinsic Disorder in RNA-Binding Proteins

(2015) Mihaly Varadi et al.   PLoS One

Structural mechanisms of RNA recognition: sequence-specific and non-specific RNA-binding proteins and the Cas9-RNA-DNA complex

(2014) Ting Ban et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Classification of Intrinsically Disordered Regions and Proteins

(2014) Robin van der Lee et al.   CHEMICAL REVIEWS

The spliceosome: disorder and dynamics defined

(2014) Weijun Chen et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

A census of human RNA-binding proteins

(2014) Stefanie Gerstberger et al.   NATURE REVIEWS GENETICS

Promiscuity as a functional trait: intrinsically disordered regions as central players of interactomes

(2013) Alexander Cumberworth et al.   BIOCHEMICAL JOURNAL

A creature with a hundred waggly tails: intrinsically disordered proteins in the ribosome

(2013) Zhenling Peng et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Protein–RNA recognition: Cracking the code

(2013) Jozef Nahalka   JOURNAL OF THEORETICAL BIOLOGY

Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins

(2012) Alfredo Castello et al.   CELL

Dynamics in multi-domain protein recognition of RNA

(2012) Cameron D Mackereth et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Epigenetic Regulation by Long Noncoding RNAs

(2012) J. T. Lee   SCIENCE

Disease-Associated Mutations Disrupt Functionally Important Regions of Intrinsic Protein Disorder

(2012) Vladimir Vacic et al.   PLoS Computational Biology

Intrinsic Disorder in the Human Spliceosomal Proteome

(2012) Iga Korneta et al.   PLoS Computational Biology

Roles of intrinsic disorder in protein–nucleic acid interactions

(2011) H. Jane Dyson   Molecular BioSystems

Attributes of short linear motifs

(2011) Norman E. Davey et al.   Molecular BioSystems

Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction

(2011) Anh Tuân Phan et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Structure of the Eukaryotic Ribosome at 3.0 A Resolution

(2011) A. Ben-Shem et al.   SCIENCE

The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove

(2010) Richard Stefl et al.   CELL

Multitude of binding modes attainable by intrinsically disordered proteins: a portrait gallery of disorder-based complexes

(2010) Vladimir N. Uversky   CHEMICAL SOCIETY REVIEWS

Novel Protein–Protein Contacts Facilitate mRNA 3′-Processing Signal Recognition by Rna15 and Hrp1

(2010) Thomas C. Leeper et al.   JOURNAL OF MOLECULAR BIOLOGY

Library of Disordered Patterns in 3D Protein Structures

(2010) Michail Yu. Lobanov et al.   PLoS Computational Biology

Binding of the Bacteriophage P22 N-Peptide to the boxB RNA Motif Studied by Molecular Dynamics Simulations

(2009) Ranjit P. Bahadur et al.   BIOPHYSICAL JOURNAL

RNA and Disease

(2009) Thomas A. Cooper et al.   CELL

The Role of Disordered Ribosomal Protein Extensions in the Early Steps of Eubacterial 50 S Ribosomal Subunit Assembly

(2009) Youri Timsit et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Regulation of ribonuclease E activity by the L4 ribosomal protein of Escherichia coli

(2009) Dharam Singh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Large-scale analysis of secondary structure changes in proteins suggests a role for disorder-to-order transitions in nucleotide binding proteins

(2009) Adi Dan et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

What does the structure-function relationship of the HIV-1 Tat protein teach us about developing an AIDS vaccine?

(2009) Grant R Campbell et al.   Retrovirology

Mutations in FUS, an RNA Processing Protein, Cause Familial Amyotrophic Lateral Sclerosis Type 6

(2009) C. Vance et al.   SCIENCE

The SR protein family

(2009) Peter J Shepard et al.   GENOME BIOLOGY

Intrinsically Disordered Proteins in Human Diseases: Introducing the D2 Concept

(2008) Vladimir N. Uversky et al.   Annual Review of Biophysics

Structure and dynamics of the N-terminal half of hepatitis C virus core protein: An intrinsically unstructured protein

(2008) Jean-Baptiste Duvignaud et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Short Linear Motifs recognized by SH2, SH3 and Ser/Thr Kinase domains are conserved in disordered protein regions

(2008) Siyuan Ren et al.   BMC GENOMICS

RNA recognition motifs: boring? Not quite

(2008) Antoine Cléry et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Structure and function of KH domains

(2008) Roberto Valverde et al.   FEBS Journal

Understanding eukaryotic linear motifs and their role in cell signaling and regulation

(2008) Francesca Diella   Frontiers in Bioscience-Landmark

Multiple Nucleic Acid Binding Sites and Intrinsic Disorder of Severe Acute Respiratory Syndrome Coronavirus Nucleocapsid Protein: Implications for Ribonucleocapsid Protein Packaging

(2008) C.-K. Chang et al.   JOURNAL OF VIROLOGY