CAP-MAP: cap analysis protocol with minimal analyte processing, a rapid and sensitive approach to analysing mRNA cap structures

CAPAM: The mRNA Cap Adenosine N6-Methyltransferase

(2019) Victoria H. Cowling   TRENDS IN BIOCHEMICAL SCIENCES

FTO controls reversible m6Am RNA methylation during snRNA biogenesis

(2019) Jan Mauer et al.   Nature Chemical Biology

“Mining the Epitranscriptome: Detection of RNA editing and RNA modifications”

(2019) Michael F. Jantsch et al.   METHODS

METTL1 Promotes let-7 MicroRNA Processing via m7G Methylation

(2019) Luca Pandolfini et al.   MOLECULAR CELL

Transcriptome-wide Mapping of Internal N7-Methylguanosine Methylome in Mammalian mRNA

(2019) Li-Sheng Zhang et al.   MOLECULAR CELL

Identification of the m6Am Methyltransferase PCIF1 Reveals the Location and Functions of m6Am in the Transcriptome

(2019) Konstantinos Boulias et al.   MOLECULAR CELL

PCIF1 Catalyzes m6Am mRNA Methylation to Regulate Gene Expression

(2019) Erdem Sendinc et al.   MOLECULAR CELL

Manipulation by Methylation: Garnishing mRNAs with m6Am

(2019) Katelyn A. Doxtader et al.   MOLECULAR CELL

DART-seq: an antibody-free method for global m6A detection

(2019) Kate D. Meyer   NATURE METHODS

Quantifying the RNA cap epitranscriptome reveals novel caps in cellular and viral RNA

(2019) Jin Wang et al.   NUCLEIC ACIDS RESEARCH

Highly parallel direct RNA sequencing on an array of nanopores

(2018) Daniel R Garalde et al.   NATURE METHODS

2'-O-methylation of the mRNA cap protects RNAs from decapping and degradation by DXO

(2018) Frédéric Picard-Jean et al.   PLoS One

Hydrolytic activity of human Nudt16 enzyme on dinucleotide cap analogs and short capped oligonucleotides

(2018) Renata Grzela et al.   RNA

mRNA Cap Methyltransferase, RNMT-RAM, Promotes RNA Pol II-Dependent Transcription

(2018) Dhaval Varshney et al.   Cell Reports

Emerging approaches for detection of methylation sites in RNA

(2018) Anna Ovcharenko et al.   Open Biology

A recap of RNA recapping

(2018) Jackson B. Trotman et al.   Wiley Interdisciplinary Reviews-RNA

mRNA cap regulation in mammalian cell function and fate

(2018) Alison Galloway et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Cap-specific, terminal N6-methylation by a mammalian m6Am methyltransferase

(2018) Hanxiao Sun et al.   CELL RESEARCH

Cap-specific terminal N6-methylation of RNA by an RNA polymerase II–associated methyltransferase

(2018) Shinichiro Akichika et al.   SCIENCE

Noncanonical RNA-capping: Discovery, mechanism, and physiological role debate

(2018) Christina Julius et al.   Wiley Interdisciplinary Reviews-RNA

Epitranscriptomics: Shrinking maps of RNA modifications

(2017) Anya V. Grozhik et al.   NATURE

Structure of human IFIT1 with capped RNA reveals adaptable mRNA binding and mechanisms for sensing N1 and N2 ribose 2′-O methylations

(2017) Yazan M. Abbas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Label-free analysis of mRNA capping efficiency using RNase H probes and LC-MS

(2016) Michael Beverly et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Understanding the Complexity of Porous Graphitic Carbon (PGC) Chromatography: Modulation of Mobile-Stationary Phase Interactions Overcomes Loss of Retention and Reduces Variability

(2016) Tashinga E. Bapiro et al.   ANALYTICAL CHEMISTRY

CDK1-Cyclin B1 Activates RNMT, Coordinating mRNA Cap Methylation with G1 Phase Transcription

(2016) Michael Aregger et al.   MOLECULAR CELL

Reversible methylation of m6Am in the 5′ cap controls mRNA stability

(2016) Jan Mauer et al.   NATURE

Precursors of tRNAs are stabilized by methylguanosine cap structures

(2016) Takayuki Ohira et al.   Nature Chemical Biology

mRNA capping: biological functions and applications

(2016) Anand Ramanathan et al.   NUCLEIC ACIDS RESEARCH

mRNA Cap Methylation in Pluripotency and Differentiation

(2016) Laura Grasso et al.   Cell Reports

New insights into decapping enzymes and selective mRNA decay

(2016) Ewa Grudzien-Nogalska et al.   Wiley Interdisciplinary Reviews-RNA

Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome

(2015) Bastian Linder et al.   NATURE METHODS

Discovery of m7G-cap in eukaryotic mRNAs

(2015) Yasuhiro FURUICHI   PROCEEDINGS OF THE JAPAN ACADEMY SERIES B-PHYSICAL AND BIOLOGICAL SCIENCES

Multiplicity of 5′ Cap Structures Present on Short RNAs

(2014) Rehab F. Abdelhamid et al.   PLoS One

A novel synthesis and detection method for cap-associated adenosine modifications in mouse mRNA

(2011) Susanne Kruse et al.   Scientific Reports

Characterization of hMTr1, a Human Cap1 2′-O-Ribose Methyltransferase

(2010) François Bélanger et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Detection of RNA modifications

(2010) Stefanie Kellner et al.   RNA Biology

Cap and cap-binding proteins in the control of gene expression

(2010) Ivan Topisirovic et al.   Wiley Interdisciplinary Reviews-RNA

Retention studies of 2′-2′-difluorodeoxycytidine and 2′-2′-difluorodeoxyuridine nucleosides and nucleotides on porous graphitic carbon: Development of a liquid chromatography–tandem mass spectrometry method

(2009) Robert S. Jansen et al.   JOURNAL OF CHROMATOGRAPHY A

Porous graphitic carbon: A versatile stationary phase for liquid chromatography

(2009) C. West et al.   JOURNAL OF CHROMATOGRAPHY A

S-Adenosyl Homocysteine Hydrolase Is Required for Myc-Induced mRNA Cap Methylation, Protein Synthesis, and Cell Proliferation

(2009) M. E. Fernandez-Sanchez et al.   MOLECULAR AND CELLULAR BIOLOGY

Specific regulation of mRNA cap methylation by the c-Myc and E2F1 transcription factors

(2009) M D Cole et al.   ONCOGENE

The human interferon-regulated ISG95 protein interacts with RNA polymerase II and shows methyltransferase activity

(2008) Thais Haline-Vaz et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS