Article
Biology
Katherine A. Kiwimagi, Justin H. Letendre, Benjamin H. Weinberg, Junmin Wang, Mingzhe Chen, Leandro Watanabe, Chris J. Myers, Jacob Beal, Wilson W. Wong, Ron Weiss
Summary: Kiwimagi & Letendre et al. present a workflow to quantitatively define recombinase-based digitizer and predict responses to different input signals. With a mechanistic/phenotypic model that can predict circuit performance, they generate a synthetic cell-cell communication device that amplifies a synNotch output signal.
COMMUNICATIONS BIOLOGY
(2021)
Article
Neurosciences
Sunjay Letchuman, Ashley Tucker, Diego Miranda, Robert L. Adkins, Miriam Aceves, Valerie Dietz, Vipin Jagrit, Amy Leonards, Young il Lee, Jennifer N. Dulin
Summary: The study found that Hb9-lineage cells are distributed in a gradient throughout the spinal cord, including different types of cells beyond motor neurons. In vitro experiments revealed a regulatory relationship between caudalizing factors and gliogenesis, suggesting that early Hb9 expression in spinal cord neural progenitors may be induced by caudalizing factors.
Article
Biotechnology & Applied Microbiology
Yuto Kuwasaki, Kazushi Suzuki, Gaigai Yu, Shota Yamamoto, Takahiro Otabe, Yuki Kakihara, Michiru Nishiwaki, Keita Miyake, Keiji Fushimi, Ramsey Bekdash, Yoshihiro Shimizu, Rei Narikawa, Takahiro Nakajima, Masayuki Yazawa, Moritoshi Sato
Summary: This study developed a red light-activatable photoswitch called MagRed, which incorporates a red light-absorbing bacterial phytochrome, a mammalian endogenous chromophore, biliverdin, and a photo-state-specific binder. Using MagRed, a red light-activatable Cre recombinase and red light-inducible transcriptional regulators based on CRISPR-Cas9 were developed, enabling optical control of genetic manipulations in deep mammalian tissues.
NATURE BIOTECHNOLOGY
(2022)
Article
Multidisciplinary Sciences
Takeshi Yamamotoya, Shun Hasei, Yasuyuki Akasaka, Yukino Ohata, Yusuke Nakatsu, Machi Kanna, Midori Fujishiro, Hideyuki Sakoda, Hiraku Ono, Akifumi Kushiyama, Hidemi Misawa, Tomoichiro Asano
Summary: Loss of Trk-fused gene (TFG) in motor neurons leads to neuromuscular junction (NMJ) degeneration and muscle atrophy, while lack of TFG in muscles may have additional effects. These findings are important for understanding the mechanisms associated with neurodegenerative diseases.
SCIENTIFIC REPORTS
(2022)
Editorial Material
Cell & Tissue Engineering
John P. Woods, R. Sathish Srinivasan, Lorin E. Olson
Summary: The study demonstrates how combining two recombinases can improve cell specificity in mice, enhancing lineage tracing and gene inactivation.
Article
Biochemistry & Molecular Biology
Ava E. Brent, Emily A. Buchholtz, Jennifer H. Mansfield
Summary: We examined the origins of the therian sternum using developmental, genetic, and paleontological data. Our findings showed that the therian sternum was assembled from pre-existing elements, namely the interclavicle and sternal bands. These elements articulates with the clavicle and ribs and were independent elements throughout most of synapsid history. The fusion of the interclavicle and anterior sternal bands to form a presternum was a unique innovation in therians.
Article
Cell & Tissue Engineering
Takanori Yamada, Kazuya Fukasawa, Tetsuhiro Horie, Takuya Kadota, Jiajun Lyu, Kazuya Tokumura, Shinsuke Ochiai, Sayuki Iwahashi, Akane Suzuki, Gyujin Park, Rie Ueda, Megumi Yamamoto, Tatsuya Kitao, Hiroaki Shirahase, Hiroki Ochi, Shingo Sato, Takashi Iezaki, Eiichi Hinoi
Summary: MSCsCDK8 plays a crucial role in bone resorption and homeostasis by extrinsically controlling osteoclastogenesis through the STAT1-RANKL axis. Inhibition of CDK8 effectively represses MSC-dependent osteoclastogenesis and prevents bone loss.
Article
Biology
Helene Duplus-Bottin, Martin Spichty, Gerard Triqueneaux, Christophe Place, Philippe Emmanuel Mangeot, Theophile Ohlmann, Franck Vittoz, Gael Yvert
Summary: LiCre is a novel light-inducible Cre recombinase, capable of being activated within minutes by blue light with faster and stronger activation effects and lower residual activity in the dark. It shows high efficiency in both yeast and human cells, making it suitable for fundamental research, biomedical research, and industrial bioprocess control.
Article
Multidisciplinary Sciences
Miriam E. A. Tschaffon-Mueller, Elena Kempter, Lena Steppe, Sandra Kupfer, Melanie R. Kuhn, Florian Gebhard, Carlos Pankratz, Miriam Kalbitz, Konrad Schuetze, Harald Guendel, Nele Kaleck, Gudrun Strauss, Jean Vacher, Hiroshi Ichinose, Katja Weimer, Anita Ignatius, Melanie Haffner-Luntzer, Stefan O. Reber
Summary: Mental traumatization affects bone growth and repair, with tyrosine hydroxylase and beta 2-adrenoceptor playing a role in mediating the negative effects. These findings have potential clinical implications for understanding the impact of psychological stress on bone health.
NATURE COMMUNICATIONS
(2023)
Article
Biochemistry & Molecular Biology
Irena Krueger, Friedrich Reusswig, Kim Juergen Krott, Celina Fabienne Lersch, Martina Spelleken, Margitta Elvers
Summary: The study demonstrates that the mT/mG Cre reporter mouse is a suitable model for real-time visualization of platelets, analysis of cell morphology, and identification of non-recombined platelets. However, a small proportion of leukocytes exhibit mG fluorescence in PF4-Cre positive mice. Therefore, careful evaluation of platelet analysis beyond hemostasis and thrombosis should be conducted when increasing recombination of immune cells.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Multidisciplinary Sciences
Suk Joon Lee, Bart Lodder, Yao Chen, Tommaso Patriarchi, Lin Tian, Bernardo L. Sabatini
Summary: Dopamine modulates the PKA activity in spiny projection neurons during learning, with positive and negative effects occurring at different phases and being associated with different types of dopamine receptors.
Article
Pharmacology & Pharmacy
Rahul Kumar, Yun Mao, Sonika Patial, Yogesh Saini
Summary: This study investigated the effect of different Tamoxifen (TAM) regimens on whole-body gene deletion in mice using Tamoxifen-inducible Cre recombinase. The results demonstrated that a combination of TAM-diet with either TAM-injections or TAM-oral gavage showed the most efficient deletion of genes in the whole body.
FRONTIERS IN PHARMACOLOGY
(2022)
Article
Genetics & Heredity
Michael L. Nonet
Summary: This article presents a simplified method for inserting large, single-copy transgenes into the Caenorhabditis elegans genome using recombination-mediated cassette exchange (RMCE). It only relies on drug selection to obtain homozygous fluorescent protein (FP) marked transgenes in 3 generations with high efficiency. Landing sites on four chromosomes allow marking lines in different cell types. Various vectors and selection methods can be used to create transgenes expressing different colored FPs. The rapid RMCE toolbox provides a platform for developing further innovative uses of RMCE.
Review
Urology & Nephrology
Yoshiharu Muto, Benjamin D. Humphreys
Summary: Lineage tracing was originally developed to identify all progeny of a single cell during morphogenesis, but has since been applied to organ homeostasis and injury recovery. Modern techniques rely on reporter gene expression induced by cell-specific DNA recombination, and recent advances include intersectional genetics and sequencing-based genomic lineage tracing.
KIDNEY INTERNATIONAL
(2021)
Article
Multidisciplinary Sciences
Lukas Theo Schmitt, Maciej Paszkowski-Rogacz, Florian Jug, Frank Buchholz
Summary: The authors present RecGen, an algorithm for generating designer-recombinases, which was experimentally validated to predict recombinase sequences. This algorithm can accelerate the development of future designer-recombinases, providing a significant contribution to genome engineering.
NATURE COMMUNICATIONS
(2022)
Article
Neurosciences
Ya-Nan Yin, Jian Hu, Yi-Li Wei, Ze-Lin Li, Zhou-Cai Luo, Rui-Qi Wang, Ke-Xin Yang, Shu-Ji Li, Xiao-Wen Li, Jian-Ming Yang, Tian-Ming Gao
Summary: All organisms experience stress, which can lead to mood disorders like depression. Research has shown that lactate in astrocytes plays a key role in modulating the passive coping response to behavioral challenges.
NEUROSCIENCE BULLETIN
(2021)
Review
Neurosciences
Carole Escartin, Elena Galea, Andras Lakatos, James P. O'Callaghan, Gabor C. Petzold, Alberto Serrano-Pozo, Christian Steinhauser, Andrea Volterra, Giorgio Carmignoto, Amit Agarwal, Nicola J. Allen, Alfonso Araque, Luis Barbeito, Ari Barzilai, Dwight E. Bergles, Gilles Bonvento, Arthur M. Butt, Wei-Ting Chen, Martine Cohen-Salmon, Colm Cunningham, Benjamin Deneen, Bart De Strooper, Blanca Diaz-Castro, Cinthia Farina, Marc Freeman, Vittorio Gallo, James E. Goldman, Steven A. Goldman, Magdalena Gotz, Antonia Gutierrez, Philip G. Haydon, Dieter H. Heiland, Elly M. Hol, Matthew G. Holt, Masamitsu Iino, Ksenia V. Kastanenka, Helmut Kettenmann, Baljit S. Khakh, Schuichi Koizumi, C. Justin Lee, Shane A. Liddelow, Brian A. MacVicar, Pierre Magistretti, Albee Messing, Anusha Mishra, Anna V. Molofsky, Keith K. Murai, Christopher M. Norris, Seiji Okada, Stephane H. R. Oliet, Joao F. Oliveira, Aude Panatier, Vladimir Parpura, Marcela Pekna, Milos Pekny, Luc Pellerin, Gertrudis Perea, Beatriz G. Perez-Nievas, Frank W. Pfrieger, Kira E. Poskanzer, Francisco J. Quintana, Richard M. Ransohoff, Miriam Riquelme-Perez, Stefanie Robel, Christine R. Rose, Jeffrey D. Rothstein, Nathalie Rouach, David H. Rowitch, Alexey Semyanov, Swetlana Sirko, Harald Sontheimer, Raymond A. Swanson, Javier Vitorica, Ina-Beate Wanner, Levi B. Wood, Jiaqian Wu, Binhai Zheng, Eduardo R. Zimmer, Robert Zorec, Michael V. Sofroniew, Alexei Verkhratsky
Summary: The article highlights the challenges and uncertainties surrounding reactive astrocytes, advocating for comprehensive research that includes assessment of multiple molecular and functional parameters, preferably in vivo, along with multivariate statistics and determination of impact on pathological hallmarks in relevant models.
NATURE NEUROSCIENCE
(2021)
Article
Multidisciplinary Sciences
Qian Wang, Ying Kong, Ding-Yu Wu, Ji-Hong Liu, Wei Jie, Qiang-Long You, Lang Huang, Jian Hu, Huai-De Chu, Feng Gao, Neng-Yuan Hu, Zhou-Cai Luo, Xiao-Wen Li, Shu-Ji Li, Zhao-Fa Wu, Yu-Long Li, Jian-Ming Yang, Tian-Ming Gao
Summary: Astrocytes play a role in the pathophysiology of autism spectrum disorder (ASD). The study demonstrates that IP3R2 conditional KO mice exhibit ASD-like behaviors, and identifies astrocyte-derived ATP as a modulator of these behaviors in mice.
NATURE COMMUNICATIONS
(2021)
Article
Biochemistry & Molecular Biology
Ji-Hong Liu, Meng Zhang, Qian Wang, Ding-Yu Wu, Wei Jie, Neng-Yuan Hu, Jia-Zhuo Lan, Kai Zeng, Shu-Ji Li, Xiao-Wen Li, Jian-Ming Yang, Tian-Ming Gao
Summary: Through integrating synaptic inputs, astrocytic IP3 receptor type 2 (IP(3)R2)-dependent Ca2+ signaling is crucial for late-phase LTP, while neuron-derived BDNF is essential for both early and late-phase LTP. Dynamic differences in BDNF secretion play a role in modulating distinct forms of LTP, with astrocyte- and neuron-derived BDNF exhibiting different roles in memory. These findings enrich our understanding of LTP and memory at the cellular level, suggesting distinct roles of astrocytes and neurons in information integration.
MOLECULAR PSYCHIATRY
(2022)
Article
Neurosciences
Wei-Peng Li, Xiao-Hong Su, Neng-Yuan Hu, Jian Hu, Xiao-Wen Li, Jian-Ming Yang, Tian-Ming Gao
Summary: This study investigates the role of astrocytic CHRM1 in the regulation of adult hippocampal neurogenesis (AHN) and memory. The results show that genetic ablation of CHRM1 in astrocytes leads to defects in neural stem cell survival, neuronal differentiation, and maturation and integration of newborn neurons in the dentate gyrus. Astrocytic CHRM1-mediated modulation of AHN is mediated by BDNF signaling. Furthermore, CHRM1 ablation in astrocytes impairs contextual fear memory. These impairments in both AHN and memory are rescued by overexpression of astrocytic CHRM1 in the dentate gyrus.
BIOLOGICAL PSYCHIATRY
(2022)
Article
Cell Biology
Monica Imbernon, Chiara Saponaro, Hans Christian Cederberg Helms, Manon Duquenne, Daniela Fernandois, Eleonora Deligia, Raphael G. P. Denis, Daniela Herrera Moro Chao, Sowmyalakshmi Rasika, Bart Staels, Francois Pattou, Frank W. Pfrieger, Birger Brodin, Serge Luquet, Caroline Bonner, Vincent Prevot
Summary: Liraglutide is transported to the hypothalamus by specialized ependymoglial cells called tanycytes, bypassing the blood-brain barrier. Silencing GLP1R in tanycytes or inhibiting tanycytic transport blocks the effects of liraglutide on hypothalamic neurons and its anti-obesity effects.
Article
Multidisciplinary Sciences
Maria Manfredi-Lozano, Valerie Leysen, Michela Adamo, Isabel Paiva, Renaud Rovera, Jean-Michel Pignat, Fatima Ezzahra Timzoura, Michael Candlish, Sabiha Eddarkaoui, Samuel A. Malone, Mauro S. B. Silva, Sara Trova, Monica Imbernon, Laurine Decoster, Ludovica Cotellessa, Manuel Tena-Sempere, Marc Claret, Ariane Paoloni-Giacobino, Damien Plassard, Emmanuelle Paccou, Nathalie Vionnet, James Acierno, Aleksandra Maleska Maceski, Antoine Lutti, Frank Pfrieger, S. Rasika, Federico Santoni, Ulrich Boehm, Philippe Ciofi, Luc Buee, Nasser Haddjeri, Anne-Laurence Boutillier, Jens Kuhle, Andrea Messina, Bogdan Draganski, Paolo Giacobini, Nelly Pitteloud, Vincent Prevot
Summary: Currently, there is no viable treatment for cognitive and olfactory deficits in Down syndrome (DS). This study shows that a decrease in the expression of a master molecule controlling reproduction-gonadotropin-releasing hormone (GnRH) in the hypothalamus and other areas is closely associated with progressive nonreproductive neurological symptoms in a DS mouse model. Additionally, restoring physiological GnRH levels through various interventions can alleviate cognitive and olfactory defects in mice, while pulsatile GnRH therapy improves cognition and brain connectivity in adult DS patients.
Article
Cell Biology
Valerie Demais, Anne Pohl, Kirsten A. Wunderlich, Anna M. Pfaller, Lew Kaplan, Amelie Barthelemy, Robin Dittrich, Berta Puig, Bernd Giebel, Stefanie M. Hauck, Frank W. Pfrieger, Antje Grosche
Summary: This study reveals the communication mechanism of Muller cells in the retina of adult mice through the release of extracellular vesicles. The Muller cell-specific SNARE protein VAMP5 is identified as a component of extracellular vesicles and is responsive to ischemia. Furthermore, differences in the secretomes between Muller cells and neurons in vitro are uncovered.
JOURNAL OF EXTRACELLULAR VESICLES
(2022)
Article
Psychology, Multidisciplinary
Wei Jie, Petra Poulova, Syed Arslan Haider, Rohana Binti Sham
Summary: E-commerce has led to a significant increase in internet purchases. This research aims to investigate the impact of internet usage on consumer impulsive buying behavior of agriculture products in the China organic market, with a focus on the moderating role of personality traits and emotional intelligence.
FRONTIERS IN PSYCHOLOGY
(2022)
Article
Oncology
Axiu Zheng, Jianrong Bai, Yanping Ha, Yaping Yu, Yonghao Fan, Meihua Liang, Yanda Lu, Zhihua Shen, Botao Luo, Wei Jie
Summary: The downregulation of STON1 expression in kidney renal clear cell carcinoma (KIRC) is associated with tumor progression and poor survival. It may serve as a favorable indicator for immunotherapy response but an adverse indicator for targeted therapeutics in KIRC.
Review
Biochemistry & Molecular Biology
Frank W. Pfrieger
Summary: Disturbances of lipid homeostasis in cells lead to human diseases, and understanding the mechanisms and developing efficient therapies are major challenges in biomedical research. Acid sphingo-myelinase deficiency (ASMD) and Niemann-Pick type C disease (NPCD) are rare genetic diseases caused by specific gene variants that disrupt the homeostasis of sphingomyelin and cholesterol, respectively. This article traces the discovery of these diseases, highlights advances in genetic culprits and cellular mechanisms, and reveals efforts to improve diagnosis and explore new therapies.
PROGRESS IN LIPID RESEARCH
(2023)
Article
Chemistry, Medicinal
Yaping Yu, Shun Ding, Xiaoqing Xu, Dongming Yan, Yonghao Fan, Banzhan Ruan, Xiaodian Zhang, Liping Zheng, Wei Jie, Shaojiang Zheng
Summary: This study explored the pharmacological mechanism of Dangshen against hepatocellular carcinoma using network pharmacology and bioinformatics. It also confirmed the anticancer effect of luteolin, the active ingredient of Codonopsis pilosula, on HCC cells. Effective compounds and potential targets were identified, and key genes were screened out. In vitro experiments showed that luteolin inhibited HCC cell proliferation and migration, induced apoptosis, and altered cell cycle distribution.
DRUG DESIGN DEVELOPMENT AND THERAPY
(2023)
Article
Pharmacology & Pharmacy
Xiaoqing Xu, Yaping Yu, Li Yang, Bingshu Wang, Yonghao Fan, Banzhan Ruan, Xiaodian Zhang, Haofu Dai, Wenli Mei, Wei Jie, Shaojiang Zheng
Summary: In this study, the effect and mechanism of Dendrobin A, an active ingredient of the traditional Chinese medicine Dendrobium nobile, against pancreatic ductal adenocarcinoma (PDAC) were explored using network pharmacology, bioinformatics, and in vitro experiments. Dendrobin A was found to effectively fight against PDAC by targeting PLAU, leading to inhibition of proliferation, migration, and invasion, induction of apoptosis, and cell cycle arrest.
FRONTIERS IN PHARMACOLOGY
(2023)
Meeting Abstract
Neurosciences
M. Imbernon, C. Saponaro, H. C. Cederberg Helms, L. Zubiaga, S. Bitsi, M. Duquenne, A. Tomas, S. Chen, V. Salem, E. Deligia, V. Gmyr, R. Denis, J. Kerr-Conte, D. Herrera Moro Chao, D. Beiroa, B. Steals, F. Pattou, F. Pfrieger, B. Brodin, B. Jones, S. Luquet, C. Bonner, V. Prevot
Article
Cell & Tissue Engineering
Xiaomin Liao, Caixia Wu, Zhongming Shao, Shuya Zhang, Yuan Zou, Keke Wang, Yanping Ha, Jingci Xing, Axiu Zheng, Zhihua Shen, Shaojiang Zheng, Junli Guo, Wei Jie
Summary: The study reveals that SETD4 knockout can significantly enhance the proliferation of BMSCs but impair their migration and differentiation potentials, affecting cellular functions and signaling pathways by changing the genomic methylation. In addition, SETD4 also influences genes related to stem cell biology, highlighting its crucial role in the biological functions of BMSCs.
STEM CELL REVIEWS AND REPORTS
(2021)