Droplet Tn-Seq combines microfluidics with Tn-Seq for identifying complex single-cell phenotypes
出版年份 2019 全文链接
标题
Droplet Tn-Seq combines microfluidics with Tn-Seq for identifying complex single-cell phenotypes
作者
关键词
-
出版物
Nature Communications
Volume 10, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-12-16
DOI
10.1038/s41467-019-13719-9
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Bacterial Factors Required for Transmission of Streptococcus pneumoniae in Mammalian Hosts
- (2019) Hannah M. Rowe et al. Cell Host & Microbe
- Competence in Streptococcus pneumoniae and Close Commensal Relatives: Mechanisms and Implications
- (2019) Gabriela Salvadori et al. Frontiers in Cellular and Infection Microbiology
- All Yersinia Are Not Created Equal: Phenotypic Adaptation to Distinct Niches Within Mammalian Tissues
- (2018) Kimberly M. Davis Frontiers in Cellular and Infection Microbiology
- Antibiotic-Induced Cell Chaining Triggers Pneumococcal Competence by Reshaping Quorum Sensing to Autocrine-Like Signaling
- (2018) Arnau Domenech et al. Cell Reports
- Vega-Lite: A Grammar of Interactive Graphics
- (2017) Arvind Satyanarayan et al. IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS
- Quorum sensing integrates environmental cues, cell density and cell history to control bacterial competence
- (2017) Stefany Moreno-Gámez et al. Nature Communications
- Quantitative insertion-site sequencing (QIseq) for high throughput phenotyping of transposon mutants
- (2016) Iraad F. Bronner et al. GENOME RESEARCH
- Community Behavior and Spatial Regulation within a Bacterial Microcolony in Deep Tissue Sites Serves to Protect against Host Attack
- (2015) Kimberly M. Davis et al. Cell Host & Microbe
- The concept of fitness in fluctuating environments
- (2015) Bernt-Erik Sæther et al. TRENDS IN ECOLOGY & EVOLUTION
- Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons
- (2015) Kelly M. Wetmore et al. mBio
- Intra- and inter-species interactions within biofilms of important foodborne bacterial pathogens
- (2015) Efstathios Giaouris et al. Frontiers in Microbiology
- Uptake and Metabolism ofN-Acetylglucosamine and Glucosamine by Streptococcus mutans
- (2014) Zachary D. Moye et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Genomic Analyses of Pneumococci from Children with Sickle Cell Disease Expose Host-Specific Bacterial Adaptations and Deficits in Current Interventions
- (2014) Robert Carter et al. Cell Host & Microbe
- Bright Fluorescent Streptococcus pneumoniae for Live-Cell Imaging of Host-Pathogen Interactions
- (2014) Morten Kjos et al. JOURNAL OF BACTERIOLOGY
- Structural and Functional Characterization of theClostridium perfringens N-Acetylmannosamine-6-phosphate 2-Epimerase Essential for the Sialic Acid Salvage Pathway
- (2014) Marie-Cécile Pélissier et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Tracking of chromosome dynamics in liveStreptococcus pneumoniaereveals that transcription promotes chromosome segregation
- (2014) Morten Kjos et al. MOLECULAR MICROBIOLOGY
- Integration Profiling of Gene Function With Dense Maps of Transposon Integration
- (2013) Y. Guo et al. GENETICS
- Transposon insertion sequencing: a new tool for systems-level analysis of microorganisms
- (2013) Tim van Opijnen et al. NATURE REVIEWS MICROBIOLOGY
- Approaches to querying bacterial genomes with transposon-insertion sequencing
- (2013) Lars Barquist et al. RNA Biology
- Host sialoglycans and bacterial sialidases: a mucosal perspective
- (2012) Amanda L. Lewis et al. CELLULAR MICROBIOLOGY
- NonencapsulatedStreptococcus pneumoniaeresists extracellular human neutrophil elastase- and cathepsin G-mediated killing
- (2012) Dieke van der Windt et al. FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY
- A fine scale phenotype-genotype virulence map of a bacterial pathogen
- (2012) T. van Opijnen et al. GENOME RESEARCH
- NIH Image to ImageJ: 25 years of image analysis
- (2012) Caroline A Schneider et al. NATURE METHODS
- Primer3—new capabilities and interfaces
- (2012) Andreas Untergasser et al. NUCLEIC ACIDS RESEARCH
- Analysis of an Ordered, Comprehensive STM Mutant Library in Infectious Borrelia burgdorferi: Insights into the Genes Required for Mouse Infectivity
- (2012) Tao Lin et al. PLoS One
- Competitive and cooperative metabolic interactions in bacterial communities
- (2011) Shiri Freilich et al. Nature Communications
- Biofilm formation in Streptococcus pneumoniae
- (2011) Mirian Domenech et al. Microbial Biotechnology
- A transposon insertion single-gene knockout library and new ordered cosmid library for the model organism Streptomyces coelicolor A3(2)
- (2010) L. T. Fernández-Martínez et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- Pneumococcal modification of host sugars: a major contributor to colonization of the human airway?
- (2010) S.J. King Molecular Oral Microbiology
- Microfluidic Confinement of Single Cells of Bacteria in Small Volumes Initiates High-Density Behavior of Quorum Sensing and Growth and Reveals Its Variability
- (2009) James Q. Boedicker et al. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION
- Identifying Genetic Determinants Needed to Establish a Human Gut Symbiont in Its Habitat
- (2009) Andrew L. Goodman et al. Cell Host & Microbe
- Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants
- (2009) G. C. Langridge et al. GENOME RESEARCH
- Human Neutrophils Kill Streptococcus pneumoniae via Serine Proteases
- (2009) A. J. Standish et al. JOURNAL OF IMMUNOLOGY
- Tn-seq: high-throughput parallel sequencing for fitness and genetic interaction studies in microorganisms
- (2009) Tim van Opijnen et al. NATURE METHODS
- Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung
- (2009) J. D. Gawronski et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bistability, Epigenetics, and Bet-Hedging in Bacteria
- (2008) Jan-Willem Veening et al. Annual Review of Microbiology
- The Capsule Sensitizes Streptococcus pneumoniae to -Defensins Human Neutrophil Proteins 1 to 3
- (2008) K. Beiter et al. INFECTION AND IMMUNITY
- A defined transposon mutant library and its use in identifying motility genes in Vibrio cholerae
- (2008) D. E. Cameron et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now