Among‐family variation in survival and gene expression uncovers adaptive genetic variation in a threatened fish

DNA Methylation Changes in the Sperm of Captive-Reared Fish: A Route to Epigenetic Introgression in Wild Populations

(2019) Deiene Rodriguez Barreto et al.   MOLECULAR BIOLOGY AND EVOLUTION

Evaluation of adult and offspring thiamine deficiency in salmonine species from Lake Ontario

(2019) Matthew H. Futia et al.   JOURNAL OF GREAT LAKES RESEARCH

Rapid genetic adaptation to a novel environment despite a genome-wide reduction in genetic diversity

(2018) Janna R. Willoughby et al.   MOLECULAR ECOLOGY

Thiamine deficiency in fishes: causes, consequences, and potential solutions

(2018) Avril M. Harder et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Thiamine deficiency and the effectiveness of thiamine treatments through broodstock injections and egg immersion on Lake Ontario steelhead trout

(2017) M.H. Futia et al.   JOURNAL OF GREAT LAKES RESEARCH

Rapid, broad-scale gene expression evolution in experimentally harvested fish populations

(2017) Silva Uusi-Heikkilä et al.   MOLECULAR ECOLOGY

The roles of plasticity and evolutionary change in shaping gene expression variation in natural populations of extremophile fish

(2017) Courtney N. Passow et al.   MOLECULAR ECOLOGY

Parallel epigenetic modifications induced by hatchery rearing in a Pacific salmon

(2017) Jérémy Le Luyer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Metacoder: An R package for visualization and manipulation of community taxonomic diversity data

(2017) Zachary S. L. Foster et al.   PLoS Computational Biology

Thiamine deficiency impairs common eider (Somateria mollissima) reproduction in the field

(2017) Torsten Mörner et al.   Scientific Reports

On the maintenance of genetic variation and adaptation to environmental change: considerations from population genomics in fishes

(2016) L. Bernatchez   JOURNAL OF FISH BIOLOGY

Rapid genome-wide evolution in Brassica rapa populations following drought revealed by sequencing of ancestral and descendant gene pools

(2016) Steven J. Franks et al.   MOLECULAR ECOLOGY

The Atlantic salmon genome provides insights into rediploidization

(2016) Sigbjørn Lien et al.   NATURE

The industrial melanism mutation in British peppered moths is a transposable element

(2016) Arjen E. van’t Hof et al.   NATURE

Detecting Polygenic Evolution: Problems, Pitfalls, and Promises

(2016) Maren Wellenreuther et al.   TRENDS IN GENETICS

A single generation of domestication heritably alters the expression of hundreds of genes

(2016) Mark R. Christie et al.   Nature Communications

Widespread episodic thiamine deficiency in Northern Hemisphere wildlife

(2016) Lennart Balk et al.   Scientific Reports

Effects of feeding high dietary thiaminase to sub-adult Atlantic salmon from three populations

(2015) Aimee Lee S. Houde et al.   JOURNAL OF GREAT LAKES RESEARCH

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Dose-Response Analysis Using R

(2015) Christian Ritz et al.   PLoS One

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Detection and replication of epistasis influencing transcription in humans

(2014) Gibran Hemani et al.   NATURE

Evolutionary rescue in a changing world

(2014) Stephanie M. Carlson et al.   TRENDS IN ECOLOGY & EVOLUTION

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

PATHOLOGY, PHYSIOLOGIC PARAMETERS, TISSUE CONTAMINANTS, AND TISSUE THIAMINE IN MORBID AND HEALTHY CENTRAL FLORIDA ADULT AMERICAN ALLIGATORS (ALLIGATOR MISSISSIPPIENSIS)

(2013) Dale C. Honeyfield et al.   JOURNAL OF WILDLIFE DISEASES

Investigating the molecular basis of local adaptation to thermal stress: population differences in gene expression across the transcriptome of the copepod Tigriopus californicus

(2012) Sean D Schoville et al.   BMC EVOLUTIONARY BIOLOGY

The thiamine deficiency syndrome M74, a reproductive disorder of Atlantic salmon (Salmo salar) feeding in the Baltic Sea, is related to the fat and thiamine content of prey fish

(2012) M. Keinanen et al.   ICES JOURNAL OF MARINE SCIENCE

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

The history and future of Lake Champlain's fishes and fisheries

(2011) J. Ellen Marsden et al.   JOURNAL OF GREAT LAKES RESEARCH

The Genetics of Human Adaptation: Hard Sweeps, Soft Sweeps, and Polygenic Adaptation

(2010) Jonathan K. Pritchard et al.   CURRENT BIOLOGY

The relationship between maternal phenotype and offspring quality: Do older mothers really produce the best offspring?

(2010) Dustin J. Marshall et al.   ECOLOGY

Gizzard Shad Thiaminase Activity and Its Effect on the Thiamine Status of Captive American AlligatorsAlligator mississippiensis

(2009) J. Perran Ross et al.   JOURNAL OF AQUATIC ANIMAL HEALTH

Influence of Thiamine Deficiency on Lake Trout Larval Growth, Foraging, and Predator Avoidance

(2009) John D. Fitzsimons et al.   JOURNAL OF AQUATIC ANIMAL HEALTH

Effects of Vitamin B1(Thiamine) Deficiency in Lake Trout Alevins and Preventive Treatments

(2009) Bong-Joo Lee et al.   JOURNAL OF AQUATIC ANIMAL HEALTH

Thiamine Deficiency Effects on the Vision and Foraging Ability of Lake Trout Fry

(2009) Paulo S. M. Carvalho et al.   JOURNAL OF AQUATIC ANIMAL HEALTH

Wild birds of declining European species are dying from a thiamine deficiency syndrome

(2009) L. Balk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Thiamine deficiency-related brain dysfunction in chronic liver failure

(2008) Roger F. Butterworth   METABOLIC BRAIN DISEASE