Long-term nutrient inputs shift soil microbial functional profiles of phosphorus cycling in diverse agroecosystems

Long-term nitrogen fertilization decreases bacterial diversity and favors the growth of Actinobacteria and Proteobacteria in agro-ecosystems across the globe

(2018) Zhongmin Dai et al.   GLOBAL CHANGE BIOLOGY

One-time phosphate fertilizer application to grassland columns modifies the soil microbiota and limits its role in ecosystem services

(2018) Israel Ikoyi et al.   SCIENCE OF THE TOTAL ENVIRONMENT

A meta-analysis of soil extracellular enzyme activities in response to global change

(2018) Wen Xiao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Phosphate levels influence the utilisation of rice rhizodeposition carbon and the phosphate-solubilising microbial community in a paddy soil

(2018) Xi-En Long et al.   SOIL BIOLOGY & BIOCHEMISTRY

Temporal variations of phosphorus uptake by soil microbial biomass and young beech trees in two forest soils with contrasting phosphorus stocks

(2018) Marie Spohn et al.   SOIL BIOLOGY & BIOCHEMISTRY

Metatranscriptome of human faecal microbial communities in a cohort of adult men

(2018) Galeb S. Abu-Ali et al.   Nature Microbiology

Differential responses of soil bacterial communities to long-term N and P inputs in a semi-arid steppe

(2017) Ning Ling et al.   GEODERMA

Responses of terrestrial ecosystem phosphorus cycling to nitrogen addition: A meta-analysis

(2017) Qi Deng et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Effects of P limitation and molecules from peanut root exudates on pqq E gene expression and pqq promoter activity in the phosphate-solubilizing strain Serratia sp. S119

(2017) Liliana M. Ludueña et al.   RESEARCH IN MICROBIOLOGY

Biochar amendment and phosphorus fertilization altered forest soil microbial community and native soil organic matter molecular composition

(2016) Perry J. Mitchell et al.   BIOGEOCHEMISTRY

Phosphorus depletion in forest soils shapes bacterial communities towards phosphorus recycling systems

(2016) Fabian Bergkemper et al.   ENVIRONMENTAL MICROBIOLOGY

The effect of host genetics on the gut microbiome

(2016) Marc Jan Bonder et al.   NATURE GENETICS

Increased phosphate uptake but not resorption alleviates phosphorus deficiency induced by nitrogen deposition in temperateLarix principis-rupprechtiiplantations

(2016) Meifeng Deng et al.   NEW PHYTOLOGIST

Total and active microbial communities and phoD as affected by phosphate depletion and pH in soil

(2016) Sabine A. Ragot et al.   PLANT AND SOIL

Intensification of phosphorus cycling in China since the 1600s

(2016) Xin Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrogen fertilization directly affects soil bacterial diversity and indirectly affects bacterial community composition

(2016) Jun Zeng et al.   SOIL BIOLOGY & BIOCHEMISTRY

MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data

(2016) Daniel H. Huson et al.   PLoS Computational Biology

phoDAlkaline Phosphatase Gene Diversity in Soil

(2015) Sabine A. Ragot et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe

(2015) Jonathan W. Leff et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil bacterial phoD gene abundance and expression in response to applied phosphorus and long-term management

(2015) Tandra D. Fraser et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil microbial biomass C:N:P stoichiometry and microbial use of organic phosphorus

(2015) Christine Heuck et al.   SOIL BIOLOGY & BIOCHEMISTRY

FastRFunctions for Robust Correlations and Hierarchical Clustering

(2015) Peter Langfelder et al.   Journal of Statistical Software

Ecological roles of dominant and rare prokaryotes in acid mine drainage revealed by metagenomics and metatranscriptomics

(2014) Zheng-Shuang Hua et al.   ISME Journal

Fast and sensitive protein alignment using DIAMOND

(2014) Benjamin Buchfink et al.   NATURE METHODS

Can the isotopic exchange kinetic method be used in soils with a very low water extractable phosphate content and a high sorbing capacity for phosphate ions?

(2013) Lalajaona Randriamanantsoa et al.   GEODERMA

Moderate changes in nutrient input alter tropical microbial and protist communities and belowground linkages

(2013) Valentyna Krashevska et al.   ISME Journal

Organophosphonates revealed: new insights into the microbial metabolism of ancient molecules

(2013) John W. McGrath et al.   NATURE REVIEWS MICROBIOLOGY

Long-term phosphorus fertilisation increased the diversity of the total bacterial community and the phoD phosphorus mineraliser group in pasture soils

(2012) Hao Tan et al.   BIOLOGY AND FERTILITY OF SOILS

Coupled soil-availability and tree-limitation nutritional shifts induced by N deposition: insights from N to P relationships in Abies pinsapo forests

(2012) M. C. Blanes et al.   PLANT AND SOIL

An Alkaline Phosphatase/Phosphodiesterase, PhoD, Induced by Salt Stress and Secreted Out of the Cells of Aphanothece halophytica, a Halotolerant Cyanobacterium

(2011) Hakuto Kageyama et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrroloquinoline Quinone Biosynthesis GenepqqC, a Novel Molecular Marker for Studying the Phylogeny and Diversity of Phosphate-Solubilizing Pseudomonads

(2011) Joana Beatrice Meyer et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Using network analysis to explore co-occurrence patterns in soil microbial communities

(2011) Albert Barberán et al.   ISME Journal

Soil Microorganisms Mediating Phosphorus Availability Update on Microbial Phosphorus

(2011) A. E. Richardson et al.   PLANT PHYSIOLOGY

Role of the phosphatase PhoX in the phosphorus metabolism of the marine bacterium Ruegeria pomeroyi DSS-3

(2011) M. Sebastian et al.   Environmental Microbiology Reports

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Global regulation by the seven-component Pi signaling system

(2010) Yi-Ju Hsieh et al.   CURRENT OPINION IN MICROBIOLOGY

Consistent effects of nitrogen fertilization on soil bacterial communities in contrasting systems

(2010) Kelly S. Ramirez et al.   ECOLOGY

Soil bacterial and fungal communities across a pH gradient in an arable soil

(2010) Johannes Rousk et al.   ISME Journal

Significant Acidification in Major Chinese Croplands

(2010) J. H. Guo et al.   SCIENCE