Mapping the Segmental Microbiomes in the Human Small Bowel in Comparison with Stool: A REIMAGINE Study

Spatial and Temporal Analysis of the Stomach and Small-Intestinal Microbiota in Fasted Healthy Humans

(2019) Anna M. Seekatz et al.   mSphere

A glycyl radical enzyme enables hydrogen sulfide production by the human intestinal bacterium Bilophila wadsworthia

(2019) Spencer C. Peck et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sa1912 – Revealing the Entire Intestinal Microbiota and Its Associations to the Genetic, Immunologic, and Neuroendocrine Ecosystems: Methodology for the Reimagine Study

(2019) Rashin Sedighi et al.   GASTROENTEROLOGY

Small intestinal microbial dysbiosis underlies symptoms associated with functional gastrointestinal disorders

(2019) George B. Saffouri et al.   Nature Communications

Involvement of shared mucosal-associated microbiota in the duodenum and rectum in diarrhea-predominant irritable bowel syndrome

(2018) Gangping Li et al.   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

Microbial Ecology along the Gastrointestinal Tract

(2017) Ethan T. Hillman et al.   MICROBES AND ENVIRONMENTS

Proteobacteria: A Common Factor in Human Diseases

(2017) G. Rizzatti et al.   Biomed Research International

Normalization and microbial differential abundance strategies depend upon data characteristics

(2017) Sophie Weiss et al.   Microbiome

Metagenomics Reveals Dysbiosis and a Potentially Pathogenic N. flavescens Strain in Duodenum of Adult Celiac Patients

(2016) Valeria D'Argenio et al.   AMERICAN JOURNAL OF GASTROENTEROLOGY

Revised Estimates for the Number of Human and Bacteria Cells in the Body

(2016) Ron Sender et al.   PLOS BIOLOGY

Diversity of Duodenal and Rectal Microbiota in Biopsy Tissues and Luminal Contents in Healthy Volunteers

(2015) Gangping Li et al.   JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY

Small intestinal bacterial overgrowth: duodenal aspirationvsglucose breath test

(2015) A. Erdogan et al.   NEUROGASTROENTEROLOGY AND MOTILITY

Differences of microbiota in small bowel and faeces between irritable bowel syndrome patients and healthy subjects

(2015) Chen-Shuan Chung et al.   SCANDINAVIAN JOURNAL OF GASTROENTEROLOGY

No difference in small bowel microbiota between patients with irritable bowel syndrome and healthy controls

(2015) Aldona Dlugosz et al.   Scientific Reports

Bile acids and the gut microbiome

(2014) Jason M. Ridlon et al.   CURRENT OPINION IN GASTROENTEROLOGY

Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle

(2014) Xuesong He et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Insights into the distribution and abundance of the ubiquitous Candidatus Saccharibacteria phylum following tag pyrosequencing

(2014) Belinda Ferrari et al.   Scientific Reports

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Dysmotility and proton pump inhibitor use are independent risk factors for small intestinal bacterial and/or fungal overgrowth

(2013) C. Jacobs et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

Anti-obesity effects of gut microbiota are associated with lactic acid bacteria

(2013) Yueh-Ting Tsai et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Structural alterations of faecal and mucosa-associated bacterial communities in irritable bowel syndrome

(2012) Ana Durbán et al.   Environmental Microbiology Reports

Lactic acid bacteria contribution to gut microbiota complexity: lights and shadows

(2012) Enrica Pessione   Frontiers in Cellular and Infection Microbiology

High temporal and inter-individual variation detected in the human ileal microbiota

(2010) Carien C. G. M. Booijink et al.   ENVIRONMENTAL MICROBIOLOGY

Molecular analysis of faecal and duodenal samples reveals significantly higher prevalence and numbers of Pseudomonas aeruginosa in irritable bowel syndrome

(2010) A. P. M. Kerckhoffs et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Better living through microbial action: the benefits of the mammalian gastrointestinal microbiota on the host

(2009) Thomas D. Leser et al.   ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing analysis of the Oral Microflora of healthy adults

(2009) B.J.F. Keijser et al.   JOURNAL OF DENTAL RESEARCH

Bacterial Community Variation in Human Body Habitats Across Space and Time

(2009) E. K. Costello et al.   SCIENCE