标题
Charting the diversity of uncultured viruses of Archaea and Bacteria
作者
关键词
-
出版物
BMC BIOLOGY
Volume 17, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-12-30
DOI
10.1186/s12915-019-0723-8
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Classify viruses — the gain is worth the pain
- (2019) Jens H. Kuhn et al. NATURE
- Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks
- (2019) Ho Bin Jang et al. NATURE BIOTECHNOLOGY
- Evaluation of a concatenated protein phylogeny for classification of tailed double-stranded DNA viruses belonging to the order Caudovirales
- (2019) Soo Jen Low et al. Nature Microbiology
- Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy
- (2018) Pakorn Aiewsakun et al. JOURNAL OF GENERAL VIROLOGY
- Biological species in the viral world
- (2018) Louis-Marie Bobay et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Gene Co-occurrence Networks Reflect Bacteriophage Ecology and Evolution
- (2018) Jason W. Shapiro et al. mBio
- Thousands of Novel Endolysins Discovered in Uncultured Phage Genomes
- (2018) Iris Fernández-Ruiz et al. Frontiers in Microbiology
- A communal catalogue reveals Earth’s multiscale microbial diversity
- (2017) Luke R. Thompson et al. NATURE
- Virus taxonomy in the age of metagenomics
- (2017) Peter Simmonds et al. NATURE REVIEWS MICROBIOLOGY
- Diel cycling and long-term persistence of viruses in the ocean’s euphotic zone
- (2017) Frank O. Aylward et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Bacteriophage Distributions and Temporal Variability in the Ocean’s Interior
- (2017) Elaine Luo et al. mBio
- Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceans
- (2017) Felipe H. Coutinho et al. Nature Communications
- Ecogenomics of virophages and their giant virus hosts assessed through time series metagenomics
- (2017) Simon Roux et al. Nature Communications
- Single-virus genomics reveals hidden cosmopolitan and abundant viruses
- (2017) Francisco Martinez-Hernandez et al. Nature Communications
- Genome diversity of marine phages recovered from Mediterranean metagenomes: Size matters
- (2017) Mario López-Pérez et al. PLoS Genetics
- Putative archaeal viruses from the mesopelagic ocean
- (2017) Dean R. Vik et al. PeerJ
- vConTACT: an iVirus tool to classify double-stranded DNA viruses that infect Archaea and Bacteria
- (2017) Benjamin Bolduc et al. PeerJ
- VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data
- (2017) Jie Ren et al. Microbiome
- Environmental Viral Genomes Shed New Light on Virus-Host Interactions in the Ocean
- (2017) Yosuke Nishimura et al. mSphere
- Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee
- (2016) Mart Krupovic et al. ARCHIVES OF VIROLOGY
- Uncovering Earth’s virome
- (2016) David Paez-Espino et al. NATURE
- Prokaryotic Virus Orthologous Groups (pVOGs): a resource for comparative genomics and protein family annotation
- (2016) Ana Laura Grazziotin et al. NUCLEIC ACIDS RESEARCH
- Genomes of Abundant and Widespread Viruses from the Deep Ocean
- (2016) Carolina Megumi Mizuno et al. mBio
- Structure and function of the global ocean microbiome
- (2015) S. Sunagawa et al. SCIENCE
- Patterns and ecological drivers of ocean viral communities
- (2015) J. R. Brum et al. SCIENCE
- Integration of genomic and proteomic analyses in the classification of the Siphoviridae family
- (2015) Evelien M. Adriaenssens et al. VIROLOGY
- Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
- (2015) Simon Roux et al. eLife
- Analysis of virus genomes from glacial environments reveals novel virus groups with unusual host interactions
- (2015) Christopher M. Bellas et al. Frontiers in Microbiology
- Biodiversity and distribution of polar freshwater DNA viruses
- (2015) D. Aguirre de Carcer et al. Science Advances
- High-Level Diversity of Tailed Phages, Eukaryote-Associated Viruses, and Virophage-Like Elements in the Metaviromes of Antarctic Soils
- (2014) Olivier Zablocki et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Fast and sensitive protein alignment using DIAMOND
- (2014) Benjamin Buchfink et al. NATURE METHODS
- The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts
- (2014) Pedro H. Oliveira et al. NUCLEIC ACIDS RESEARCH
- Soil Microbial Community Responses to a Decade of Warming as Revealed by Comparative Metagenomics
- (2013) Chengwei Luo et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- GET_HOMOLOGUES, a Versatile Software Package for Scalable and Robust Microbial Pangenome Analysis
- (2013) Bruno Contreras-Moreira et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Microbial and viral metagenomes of a subtropical freshwater reservoir subject to climatic disturbances
- (2013) Ching-Hung Tseng et al. ISME Journal
- Molecular Aspects and Comparative Genomics of Bacteriophage Endolysins
- (2013) H. Oliveira et al. JOURNAL OF VIROLOGY
- Revenge of the phages: defeating bacterial defences
- (2013) Julie E. Samson et al. NATURE REVIEWS MICROBIOLOGY
- Rapid evolution of the human gut virome
- (2013) S. Minot et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Expanding the Marine Virosphere Using Metagenomics
- (2013) Carolina Megumi Mizuno et al. PLoS Genetics
- The PAMPA datasets: a metagenomic survey of microbial communities in Argentinean pampean soils
- (2013) Nicolás Rascovan et al. Microbiome
- CD-HIT: accelerated for clustering the next-generation sequencing data
- (2012) Limin Fu et al. BIOINFORMATICS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Metagenomic Exploration of Viruses throughout the Indian Ocean
- (2012) Shannon J. Williamson et al. PLoS One
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism
- (2011) L. R. Thompson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Prodigal: prokaryotic gene recognition and translation initiation site identification
- (2010) Doug Hyatt et al. BMC BIOINFORMATICS
- Reticulate Representation of Evolutionary and Functional Relationships between Phage Genomes
- (2008) G. Lima-Mendez et al. MOLECULAR BIOLOGY AND EVOLUTION
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