Xylan degradation by the human gut Bacteroides xylanisolvens XB1AT involves two distinct gene clusters that are linked at the transcriptional level

Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis

(2016) Jordane Despres et al.   BMC GENOMICS

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

Glycan complexity dictates microbial resource allocation in the large intestine

(2015) Artur Rogowski et al.   Nature Communications

Biomass Utilization by Gut Microbiomes

(2014) Bryan A. White et al.   Annual Review of Microbiology

Automatic prediction of polysaccharide utilization loci in Bacteroidetes species

(2014) Nicolas Terrapon et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Probing the structural details of xylan degradation by real-time NMR spectroscopy

(2014) Bent Ole Petersen et al.   CARBOHYDRATE POLYMERS

The Devil Lies in the Details: How Variations in Polysaccharide Fine-Structure Impact the Physiology and Evolution of Gut Microbes

(2014) Eric C. Martens et al.   JOURNAL OF MOLECULAR BIOLOGY

Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes

(2014) M. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Ability of Bifidobacteria To Degrade Arabinoxylan Oligosaccharide Constituents and Derived Oligosaccharides Is Strain Dependent

(2013) Audrey Rivière et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Arabinoxylans and human health

(2013) M. Mendis et al.   FOOD HYDROCOLLOIDS

Computational analysis of bacterial RNA-Seq data

(2013) Ryan McClure et al.   NUCLEIC ACIDS RESEARCH

Interactions of structurally different hemicelluloses with nanofibrillar cellulose

(2011) Paula Eronen et al.   CARBOHYDRATE POLYMERS

Prebiotic and Other Health-Related Effects of Cereal-Derived Arabinoxylans, Arabinoxylan-Oligosaccharides, and Xylooligosaccharides

(2011) Willem F. Broekaert et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Recognition and Degradation of Plant Cell Wall Polysaccharides by Two Human Gut Symbionts

(2011) Eric C. Martens et al.   PLOS BIOLOGY

Novel Glycoside Hydrolases Identified by Screening a Chinese Holstein Dairy Cow Rumen-Derived Metagenome Library

(2010) S. Zhao et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of Xyn10A, a highly active xylanase from the human gut bacterium Bacteroides xylanisolvens XB1A

(2010) Caroline Mirande et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Hemicelluloses for fuel ethanol: A review

(2010) F.M. Gírio et al.   BIORESOURCE TECHNOLOGY

Transcriptomic Analyses of Xylan Degradation byPrevotella bryantiiand Insights into Energy Acquisition by Xylanolytic Bacteroidetes

(2010) Dylan Dodd et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes

(2010) Dylan Dodd et al.   MOLECULAR MICROBIOLOGY

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

The Biochemistry and Structural Biology of Plant Cell Wall Deconstruction

(2010) H. J. Gilbert   PLANT PHYSIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Films from oat spelt arabinoxylan plasticized with glycerol and sorbitol

(2009) Kirsi S. Mikkonen et al.   JOURNAL OF APPLIED POLYMER SCIENCE

Development of a RT-qPCR method for the quantification of Fibrobacter succinogenes S85 glycoside hydrolase transcripts in the rumen content of gnotobiotic and conventional sheep

(2009) Christel Béra-Maillet et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Bacteroides xylanisolvens sp. nov., a xylan-degrading bacterium isolated from human faeces

(2008) C. Chassard et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY