Performance of genomic prediction within and across generations in maritime pine

Genomic selection in maritime pine

(2016) Fikret Isik et al.   PLANT SCIENCE

Prediction accuracies for growth and wood attributes of interior spruce in space using genotyping-by-sequencing

(2015) Omnia Gamal El-Dien et al.   BMC GENOMICS

Perspectives for Genomic Selection Applications and Research in Plants

(2015) Nicolas Heslot et al.   CROP SCIENCE

A comparison of genomic selection models across time in interior spruce (Picea engelmannii × glauca) using unordered SNP imputation methods

(2015) B Ratcliffe et al.   HEREDITY

High-density SNP assay development for genetic analysis in maritime pine (Pinus pinaster)

(2015) C. Plomion et al.   Molecular Ecology Resources

Paternity recovery in two maritime pine polycross mating designs and consequences for breeding

(2015) Marjorie Vidal et al.   Tree Genetics & Genomes

Assessing Genomic Selection Prediction Accuracy in a Dynamic Barley Breeding Population

(2015) A. H. Sallam et al.   Plant Genome

Sequencing millions of animals for genomic selection 2.0

(2015) J. M. Hickey   JOURNAL OF ANIMAL BREEDING AND GENETICS

Genomic selection accuracies within and between environments and small breeding groups in white spruce

(2014) Jean Beaulieu et al.   BMC GENOMICS

Genome-wide distribution of genetic diversity and linkage disequilibrium in a mass-selected population of maritime pine

(2014) Christophe Plomion et al.   BMC GENOMICS

Genomic Relationship Matrix for Correcting Pedigree Errors in Breeding Populations: Impact on Genetic Parameters and Genomic Selection Accuracy

(2014) Patricio R. Munoz et al.   CROP SCIENCE

Genome-Wide Regression and Prediction with the BGLR Statistical Package

(2014) P. Perez et al.   GENETICS

Accuracy of genomic selection models in a large population of open-pollinated families in white spruce

(2014) J Beaulieu et al.   HEREDITY

Single Step, a general approach for genomic selection

(2014) Andres Legarra et al.   Livestock Science

Genomic selection in forest tree breeding: the concept and an outlook to the future

(2014) Fikret Isik   NEW FORESTS

Potential for marker-assisted selection for forest tree breeding: lessons from 20 years of MAS in crops

(2014) H. Muranty et al.   Tree Genetics & Genomes

Priors in Whole-Genome Regression: The Bayesian Alphabet Returns

(2013) D. Gianola   GENETICS

Genomic BLUP Decoded: A Look into the Black Box of Genomic Prediction

(2013) D. Habier et al.   GENETICS

De novoassembly of maritime pine transcriptome: implications for forest breeding and biotechnology

(2013) Javier Canales et al.   PLANT BIOTECHNOLOGY JOURNAL

synbreed: a framework for the analysis of genomic prediction data using R

(2012) Valentin Wimmer et al.   BIOINFORMATICS

Accuracy of Genomic Selection Methods in a Standard Data Set of Loblolly Pine (Pinus taeda L.)

(2012) M. F. R. Resende et al.   GENETICS

Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest treePopulus trichocarpa

(2012) Gancho T. Slavov et al.   NEW PHYTOLOGIST

Genomic selection for growth and wood quality in Eucalyptus: capturing the missing heritability and accelerating breeding for complex traits in forest trees

(2012) Marcos D. V. Resende et al.   NEW PHYTOLOGIST

Genome-based prediction of test cross performance in two subsequent breeding cycles

(2012) Nina Hofheinz et al.   THEORETICAL AND APPLIED GENETICS

SNP markers trace familial linkages in a cloned population of Pinus taeda—prospects for genomic selection

(2012) Jaime Zapata-Valenzuela et al.   Tree Genetics & Genomes

Genomic selection in plant breeding: from theory to practice

(2011) J.-L. Jannink et al.   Briefings in Functional Genomics

Genomic Selection in Plant Breeding: A Comparison of Models

(2011) Nicolas Heslot et al.   CROP SCIENCE

Reliability of direct genomic values for animals with different relationships within and to the reference population

(2011) M. Pszczola et al.   JOURNAL OF DAIRY SCIENCE

Accelerating the domestication of trees using genomic selection: accuracy of prediction models across ages and environments

(2011) M. F. R. Resende et al.   NEW PHYTOLOGIST

Prospects for genomic selection in conifer breeding: a simulation study of Cryptomeria japonica

(2011) Hiroyoshi Iwata et al.   Tree Genetics & Genomes

Accuracy and Training Population Design for Genomic Selection on Quantitative Traits in Elite North American Oats

(2011) Franco G. Asoro et al.   Plant Genome

Microsatellites used to establish full pedigree in a half-sib trial and correlation between number of male strobili and paternal success

(2010) Ole K. Hansen et al.   ANNALS OF FOREST SCIENCE

pegas: an R package for population genetics with an integrated-modular approach

(2010) E. Paradis   BIOINFORMATICS

Hot topic: A unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score1

(2010) I. Aguilar et al.   JOURNAL OF DAIRY SCIENCE

Genomic selection in forest tree breeding

(2010) Dario Grattapaglia et al.   Tree Genetics & Genomes

Genomic-Enabled Prediction Based on Molecular Markers and Pedigree Using the Bayesian Linear Regression Package in R

(2010) Paulino Pérez et al.   Plant Genome

Factors Affecting Accuracy From Genomic Selection in Populations Derived From Multiple Inbred Lines: A Barley Case Study

(2009) S. Zhong et al.   GENETICS

A relationship matrix including full pedigree and genomic information

(2009) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE

Invited review: Genomic selection in dairy cattle: Progress and challenges

(2009) B.J. Hayes et al.   JOURNAL OF DAIRY SCIENCE

Genomic selection: prediction of accuracy and maximisation of long term response

(2008) Mike Goddard   GENETICA

Accuracy of Genomic Selection Using Different Methods to Define Haplotypes

(2008) M. P. L. Calus et al.   GENETICS

Performance of Genomic Selection in Mice

(2008) A. Legarra et al.   GENETICS

Genomic selection using different marker types and densities

(2008) T. R. Solberg et al.   JOURNAL OF ANIMAL SCIENCE

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

The Bayesian Lasso

(2008) Trevor Park et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Genomewide selection in oil palm: increasing selection gain per unit time and cost with small populations

(2008) C. K. Wong et al.   THEORETICAL AND APPLIED GENETICS