De novoassembly of maritime pine transcriptome: implications for forest breeding and biotechnology
出版年份 2013 全文链接
标题
De novoassembly of maritime pine transcriptome: implications for forest breeding and biotechnology
作者
关键词
-
出版物
PLANT BIOTECHNOLOGY JOURNAL
Volume 12, Issue 3, Pages 286-299
出版商
Wiley
发表日期
2013-11-21
DOI
10.1111/pbi.12136
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- (2013) Inanc Birol et al. BIOINFORMATICS
- High-density linkage mapping in a pine tree reveals a genomic region associated with inbreeding depression and provides clues to the extent and distribution of meiotic recombination
- (2013) Emilie Chancerel et al. BMC BIOLOGY
- The Norway spruce genome sequence and conifer genome evolution
- (2013) Björn Nystedt et al. NATURE
- The family of Dof transcription factors in pine
- (2013) Marina Rueda-López et al. TREES-STRUCTURE AND FUNCTION
- Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms and angiosperms
- (2012) Jun Chen et al. BMC GENOMICS
- A catalogue of putative unique transcripts from Douglas-fir (Pseudotsuga menziesii) based on 454 transcriptome sequencing of genetically diverse, drought stressed seedlings
- (2012) Thomas Müller et al. BMC GENOMICS
- Reprogramming of gene expression during compression wood formation in pine: Coordinated modulation of S-adenosylmethionine, lignin and lignan related genes
- (2012) David P Villalobos et al. BMC PLANT BIOLOGY
- Accuracy of Genomic Selection Methods in a Standard Data Set of Loblolly Pine (Pinus taeda L.)
- (2012) M. F. R. Resende et al. GENETICS
- Ecological and genetic factors linked to contrasting genome dynamics in seed plants
- (2012) A. R. Leitch et al. NEW PHYTOLOGIST
- Large-scale transcriptome characterization and mass discovery of SNPs in globe artichoke and its related taxa
- (2012) Davide Scaglione et al. PLANT BIOTECHNOLOGY JOURNAL
- Towards decoding the conifer giga-genome
- (2012) John Mackay et al. PLANT MOLECULAR BIOLOGY
- Genomics of a phylum distant from flowering plants: conifers
- (2012) Kermit Ritland Tree Genetics & Genomes
- Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species
- (2012) W. Walter Lorenz et al. Tree Genetics & Genomes
- Novel Insights into Regulation of Asparagine Synthetase in Conifers
- (2012) Javier Canales et al. Frontiers in Plant Science
- Comparative studies of de novo assembly tools for next-generation sequencing technologies
- (2011) Yong Lin et al. BIOINFORMATICS
- EuroPineDB: a high-coverage web database for maritime pine transcriptome
- (2011) Noé Fernández-Pozo et al. BMC GENOMICS
- Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine
- (2011) Emilie Chancerel et al. BMC GENOMICS
- Profiling the venom gland transcriptomes of Costa Rican snakes by 454 pyrosequencing
- (2011) Jordi Durban et al. BMC GENOMICS
- Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees
- (2011) Caroline L Côté et al. BMC PLANT BIOLOGY
- Forest tree genomics: growing resources and applications
- (2011) David B. Neale et al. NATURE REVIEWS GENETICS
- A White Spruce Gene Catalog for Conifer Genome Analyses
- (2011) Philippe Rigault et al. PLANT PHYSIOLOGY
- Association mapping for growth, straightness and wood chemistry traits in the Pinus pinaster Aquitaine breeding population
- (2011) Camille Lepoittevin et al. Tree Genetics & Genomes
- Accelerating the domestication of forest trees in a changing world
- (2011) Antoine Harfouche et al. TRENDS IN PLANT SCIENCE
- SeqTrim: a high-throughput pipeline for preprocessing any type of sequence reads
- (2010) Juan Falgueras et al. BMC BIOINFORMATICS
- Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate
- (2010) Wiesław Babik et al. BMC GENOMICS
- Transcriptome sequencing in an ecologically important tree species: assembly, annotation, and marker discovery
- (2010) Thomas L Parchman et al. BMC GENOMICS
- Subgroup 4 R2R3-MYBs in conifer trees: gene family expansion and contribution to the isoprenoid- and flavonoid-oriented responses
- (2010) Frank Bedon et al. JOURNAL OF EXPERIMENTAL BOTANY
- A coding-independent function of gene and pseudogene mRNAs regulates tumour biology
- (2010) Laura Poliseno et al. NATURE
- In Vitro vs In Silico Detected SNPs for the Development of a Genotyping Array: What Can We Learn from a Non-Model Species?
- (2010) Camille Lepoittevin et al. PLoS One
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Comparative genome analysis of lignin biosynthesis gene families across the plant kingdom
- (2009) Zhanyou Xu et al. BMC BIOINFORMATICS
- Generation and analysis of expressed sequence tags from six developing xylem libraries in Pinus radiata D. Don
- (2009) Xinguo Li et al. BMC GENOMICS
- De novo assembly of human genomes with massively parallel short read sequencing
- (2009) R. Li et al. GENOME RESEARCH
- PlnTFDB: updated content and new features of the plant transcription factor database
- (2009) Paulino Pérez-Rodríguez et al. NUCLEIC ACIDS RESEARCH
- Evolution of Genome Size and Complexity in Pinus
- (2009) Alison M. Morse et al. PLoS One
- Intra-specific variability in biomass partitioning and carbon isotopic discrimination under moderate drought stress in seedlings from four Pinus pinaster populations
- (2009) Ismael Aranda et al. Tree Genetics & Genomes
- Characterization of expressed sequence tags from a full-length enriched cDNA library of Cryptomeria japonica male strobili
- (2008) Norihiro Futamura et al. BMC GENOMICS
- A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis)
- (2008) Steven G Ralph et al. BMC GENOMICS
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