A quantitative genome-wide RNAi screen in C. elegans for antifungal innate immunity genes

Local and long-range activation of innate immunity by infection and damage in C. elegans

(2016) Jonathan J. Ewbank et al.   CURRENT OPINION IN IMMUNOLOGY

Context Specificity of Stress-activated Mitogen-activated Protein (MAP) Kinase Signaling: The Story as Told byCaenorhabditis elegans

(2016) Matthew G. Andrusiak et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mitophagy and the mitochondrial unfolded protein response in neurodegeneration and bacterial infection

(2015) Mark W Pellegrino et al.   BMC BIOLOGY

Microbial pathogenesis and host defense in the nematode C. elegans

(2015) Lianne B Cohen et al.   CURRENT OPINION IN MICROBIOLOGY

Genome-wide screen identifies a novel p97/CDC-48-dependent pathway regulating ER-stress-induced gene transcription

(2015) E. Marza et al.   EMBO REPORTS

Panorama of ancient metazoan macromolecular complexes

(2015) Cuihong Wan et al.   NATURE

Ubiquitination in the antiviral immune response

(2015) Meredith E. Davis et al.   VIROLOGY

Transcription Factor Activity Mapping of a Tissue-Specific In Vivo Gene Regulatory Network

(2015) Lesley T. MacNeil et al.   Cell Systems

Characterization of Microsporidia-Induced Developmental Arrest and a Transmembrane Leucine-Rich Repeat Protein in Caenorhabditis elegans

(2015) Robert J. Luallen et al.   PLoS One

Massive expansion and functional divergence of innate immune genes in a protostome

(2015) Linlin Zhang et al.   Scientific Reports

Independent Synchronized Control and Visualization of Interactions between Living Cells and Organisms

(2014) Vincent Rouger et al.   BIOPHYSICAL JOURNAL

Re-evaluation of the Immunological Big Bang

(2014) Martin F. Flajnik   CURRENT BIOLOGY

Akirin specifies NF- B selectivity of Drosophila innate immune response via chromatin remodeling

(2014) F. Bonnay et al.   EMBO JOURNAL

Global Regulation of a Differentiation MAPK Pathway in Yeast

(2014) C. A. Chavel et al.   GENETICS

Caenorhabditis elegans pathways that surveil and defend mitochondria

(2014) Ying Liu et al.   NATURE

Mitochondrial UPR-regulated innate immunity provides resistance to pathogen infection

(2014) Mark W. Pellegrino et al.   NATURE

Regulatory analysis of the C. elegans genome with spatiotemporal resolution

(2014) Carlos L. Araya et al.   NATURE

Activation of a G protein–coupled receptor by its endogenous ligand triggers the innate immune response of Caenorhabditis elegans

(2014) Olivier Zugasti et al.   NATURE IMMUNOLOGY

Systemic stress signalling: understanding the cell non-autonomous control of proteostasis

(2014) Rebecca C. Taylor et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

WormNet v3: a network-assisted hypothesis-generating server for Caenorhabditis elegans

(2014) Ara Cho et al.   NUCLEIC ACIDS RESEARCH

FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations

(2014) G. dos Santos et al.   NUCLEIC ACIDS RESEARCH

Defects in the C. elegans acyl-CoA Synthase, acs-3, and Nuclear Hormone Receptor, nhr-25, Cause Sensitivity to Distinct, but Overlapping Stresses

(2014) Jordan D. Ward et al.   PLoS One

Activation of the mitochondrial unfolded protein response does not predict longevity in Caenorhabditis elegans

(2014) Christopher F. Bennett et al.   Nature Communications

Clone Mapper: An Online Suite of Tools for RNAi Experiments in Caenorhabditis elegans

(2014) Nishant Thakur et al.   G3-Genes Genomes Genetics

The Evolutionarily Conserved Mediator Subunit MDT-15/MED15 Links Protective Innate Immune Responses and Xenobiotic Detoxification

(2014) Read Pukkila-Worley et al.   PLoS Pathogens

Novel roles of the CCR4-NOT complex

(2014) Clément Chapat et al.   Wiley Interdisciplinary Reviews-RNA

Novel roles of the multi-functional CCR4-NOT complex in post-transcriptional regulation

(2014) Toshifumi Inada et al.   Frontiers in Genetics

Mapping the Pharyngeal and Intestinal pH of Caenorhabditis elegans and Real-Time Luminal pH Oscillations Using Extended Dynamic Range pH-Sensitive Nanosensors

(2013) Veeren M. Chauhan et al.   ACS Nano

The conserved Mediator subunit MDT-15 is required for oxidative stress responses inCaenorhabditis elegans

(2013) Grace Y. S. Goh et al.   AGING CELL

Integration of Metabolic and Gene Regulatory Networks Modulates the C. elegans Dietary Response

(2013) Emma Watson et al.   CELL

Direct and Indirect Gene Regulation by a Life-Extending FOXO Protein in C. elegans: Roles for GATA Factors and Lipid Gene Regulators

(2013) Peichuan Zhang et al.   Cell Metabolism

Ubiquitin in the immune system

(2013) Julia Zinngrebe et al.   EMBO REPORTS

Transcellular chaperone signaling: an organismal strategy for integrated cell stress responses

(2013) P. van Oosten-Hawle et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Identification of a Tissue-Selective Heat Shock Response Regulatory Network

(2013) Eric Guisbert et al.   PLoS Genetics

Surveillance-Activated Defenses Block the ROS–Induced Mitochondrial Unfolded Protein Response

(2013) Eva D. Runkel et al.   PLoS Genetics

GCN-2 dependent inhibition of protein synthesis activates osmosensitive gene transcription via WNK and Ste20 kinase signaling

(2012) Elaine Choung-Hee Lee et al.   AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY

VLR-Based Adaptive Immunity

(2012) Thomas Boehm et al.   Annual Review of Immunology

Inactivation of Conserved C. elegans Genes Engages Pathogen- and Xenobiotic-Associated Defenses

(2012) Justine A. Melo et al.   CELL

Host Translational Inhibition by Pseudomonas aeruginosa Exotoxin A Triggers an Immune Response in Caenorhabditis elegans

(2012) Deborah L. McEwan et al.   Cell Host & Microbe

C. elegans Detects Pathogen-Induced Translational Inhibition to Activate Immune Signaling

(2012) Tiffany L. Dunbar et al.   Cell Host & Microbe

Evolution of Vertebrate Immunity

(2012) Thomas Boehm   CURRENT BIOLOGY

Identification of small RNA pathway genes using patterns of phylogenetic conservation and divergence

(2012) Yuval Tabach et al.   NATURE

Caenorhabditis elegans screen reveals role of PAR-5 in RAB-11-recycling endosome positioning and apicobasal cell polarity

(2012) Julia Franziska Winter et al.   NATURE CELL BIOLOGY

Restraint of inflammatory signaling by interdependent strata of negative regulatory pathways

(2012) Peter J Murray et al.   NATURE IMMUNOLOGY

GenomeRNAi: a database for cell-based and in vivo RNAi phenotypes, 2013 update

(2012) Esther E. Schmidt et al.   NUCLEIC ACIDS RESEARCH

The Pseudokinase NIPI-4 Is a Novel Regulator of Antimicrobial Peptide Gene Expression

(2012) Sid ahmed Labed et al.   PLoS One

A Directed RNAi Screen Based on Larval Growth Arrest Reveals New Modifiers of C. elegans Insulin Signaling

(2012) Ola Billing et al.   PLoS One

Mitochondrial Import Efficiency of ATFS-1 Regulates Mitochondrial UPR Activation

(2012) A. M. Nargund et al.   SCIENCE

Protective Coupling of Mitochondrial Function and Protein Synthesis via the eIF2α Kinase GCN-2

(2012) Brooke M. Baker et al.   PLoS Genetics

Induction of Cytoprotective Pathways Is Central to the Extension of Lifespan Conferred by Multiple Longevity Pathways

(2012) David E. Shore et al.   PLoS Genetics

Cuticle Surface Coat of Plant-Parasitic Nematodes

(2011) Keith G. Davies et al.   Annual Review of Phytopathology

An integrative approach to ortholog prediction for disease-focused and other functional studies

(2011) Yanhui Hu et al.   BMC BIOINFORMATICS

The Cell-Non-Autonomous Nature of Electron Transport Chain-Mediated Longevity

(2011) Jenni Durieux et al.   CELL

Unusual Regulation of a STAT Protein by an SLC6 Family Transporter in C. elegans Epidermal Innate Immunity

(2011) Katja Dierking et al.   Cell Host & Microbe

C. elegans: model host and tool for antimicrobial drug discovery

(2011) J. J. Ewbank et al.   Disease Models & Mechanisms

Diversification des immunorécepteurs au cours de l’évolution des métazoaires

(2011) Louis Du Pasquier   M S-MEDECINE SCIENCES

The Specificity and Topology of Chromatin Interaction Pathways in Yeast

(2011) Tineke L. Lenstra et al.   MOLECULAR CELL

FlyRNAi.org--the database of the Drosophila RNAi screening center: 2012 update

(2011) I. T. Flockhart et al.   NUCLEIC ACIDS RESEARCH

A Comprehensive Analysis of Gene Expression Changes Provoked by Bacterial and Fungal Infection in C. elegans

(2011) Ilka Engelmann et al.   PLoS One

The Caenorhabditis elegans Mucin-Like Protein OSM-8 Negatively Regulates Osmosensitive Physiology Via the Transmembrane Protein PTR-23

(2011) Anne-Katrin Rohlfing et al.   PLoS Genetics

A Conserved PHD Finger Protein and Endogenous RNAi Modulate Insulin Signaling in Caenorhabditis elegans

(2011) Andres R. Mansisidor et al.   PLoS Genetics

A suite of MATLAB-based computational tools for automated analysis of COPAS Biosort data

(2010) Elizabeth Morton et al.   BIOTECHNIQUES

Glycosylation Genes Expressed in Seam Cells Determine Complex Surface Properties and Bacterial Adhesion to the Cuticle of Caenorhabditis elegans

(2010) M. J. Gravato-Nobre et al.   GENETICS

Intracellular Toll-like Receptors

(2010) Amanda L. Blasius et al.   IMMUNITY

The Caenorhabditis elegansbus-2Mutant Reveals a New Class ofO-Glycans Affecting Bacterial Resistance

(2010) Elizabeth Palaima et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Consensus of Core Protein Complex Compositions for Saccharomyces cerevisiae

(2010) Joris J. Benschop et al.   MOLECULAR CELL

A human MAP kinase interactome

(2010) Sourav Bandyopadhyay et al.   NATURE METHODS

Comprehensive discovery of endogenous Argonaute binding sites in Caenorhabditis elegans

(2010) Dimitrios G Zisoulis et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Genetic and Physiological Activation of Osmosensitive Gene Expression Mimics Transcriptional Signatures of Pathogen Infection in C. elegans

(2010) Anne-Katrin Rohlfing et al.   PLoS One

Endocytic pathway is required for Drosophila Toll innate immune signaling

(2010) H.-R. Huang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamic O-GlcNAc cycling at promoters of Caenorhabditis elegans genes regulating longevity, stress, and immunity

(2010) D. C. Love et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The fatty acid synthasefasn-1acts upstream of WNK and Ste20/GCK-VI kinases to modulate antimicrobial peptide expression inC. elegansepidermis

(2010) Kwang-Zin Lee et al.   Virulence

Condition-adapted stress and longevity gene regulation byCaenorhabditis elegansSKN-1/Nrf

(2009) Riva P. Oliveira et al.   AGING CELL

GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

(2009) Eran Eden et al.   BMC BIOINFORMATICS

Antifungal Innate Immunity in C. elegans: PKCδ Links G Protein Signaling and a Conserved p38 MAPK Cascade

(2009) Katja Ziegler et al.   Cell Host & Microbe

Antifungal Drug Discovery through the Study of Invertebrate Model Hosts

(2009) R. Pukkila-Worley et al.   CURRENT MEDICINAL CHEMISTRY

A Genomewide RNAi Screen for Genes That Affect the Stability, Distribution and Function of P Granules in Caenorhabditis elegans

(2009) Dustin L. Updike et al.   GENETICS

Neuroimmune regulation of antimicrobial peptide expression by a noncanonical TGF-β signaling pathway in Caenorhabditis elegans epidermis

(2009) Olivier Zugasti et al.   NATURE IMMUNOLOGY

KEGG for representation and analysis of molecular networks involving diseases and drugs

(2009) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

More than just orphans: are taxonomically-restricted genes important in evolution?

(2009) Konstantin Khalturin et al.   TRENDS IN GENETICS

Distinct Innate Immune Responses to Infection and Wounding in the C. elegans Epidermis

(2008) Nathalie Pujol et al.   CURRENT BIOLOGY

Systematic Identification of Gene Activities Promoting Hypoxic Death

(2008) M. E. Mabon et al.   GENETICS

The art and design of genetic screens: RNA interference

(2008) Michael Boutros et al.   NATURE REVIEWS GENETICS

Gamma-Linolenic and Stearidonic Acids Are Required for Basal Immunity in Caenorhabditis elegans through Their Effects on p38 MAP Kinase Activity

(2008) Madhumitha Nandakumar et al.   PLoS Genetics

The Mediator Subunit MDT-15 Confers Metabolic Adaptation to Ingested Material

(2008) Stefan Taubert et al.   PLoS Genetics

Anti-Fungal Innate Immunity in C. elegans Is Enhanced by Evolutionary Diversification of Antimicrobial Peptides

(2008) Nathalie Pujol et al.   PLoS Pathogens