Resequencing 545 ginkgo genomes across the world reveals the evolutionary history of the living fossil

Ginkgo biloba’s footprint of dynamic Pleistocene history dates back only 390,000 years ago

(2018) Nora Hohmann et al.   BMC GENOMICS

Pleistocene diversification in an ancient lineage: a role for glacial cycles in the evolutionary history of Dioon Lindl. (Zamiaceae)

(2018) Brian L. Dorsey et al.   AMERICAN JOURNAL OF BOTANY

Evolutionary history of the angiosperm flora of China

(2018) Li-Min Lu et al.   NATURE

Genomic signatures of evolution in Nautilus -An endangered living fossil

(2017) David J. Combosch et al.   MOLECULAR ECOLOGY

Variation in Linked Selection and Recombination Drive Genomic Divergence during Allopatric Speciation of European and American Aspens

(2016) Jing Wang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Palaeoclimatic records of the loess/palaeosol sequences of the Chinese Loess Plateau

(2016) Barbara A. Maher   QUATERNARY SCIENCE REVIEWS

Incongruent range dynamics between co-occurring Asian temperate tree species facilitated by life history traits

(2016) Yun-Peng Zhao et al.   Ecology and Evolution

Draft genome of the living fossil Ginkgo biloba

(2016) Rui Guan et al.   GigaScience

Chloroplast phylogeography of Dirca palustris L. indicates populations near the glacial boundary at the Last Glacial Maximum in eastern North America

(2015) Bryan J. Peterson et al.   JOURNAL OF BIOGEOGRAPHY

Colonization from divergent ancestors: glaciation signatures on contemporary patterns of genomic variation in Collared Pikas (Ochotona collaris)

(2015) Hayley C. Lanier et al.   MOLECULAR ECOLOGY

Phylogeography of Davidia involucrata (Davidiaceae) Inferred from cpDNA Haplotypes and nSSR Data

(2015) Qing Ma et al.   SYSTEMATIC BOTANY

Genetic structure and post-glacial expansion ofCornus floridaL. (Cornaceae): integrative evidence from phylogeography, population demographic history, and species distribution modeling

(2015) Ashley Call et al.   Journal of Systematics and Evolution

popart: full-feature software for haplotype network construction

(2015) Jessica W. Leigh et al.   Methods in Ecology and Evolution

Second-generation PLINK: rising to the challenge of larger and richer datasets

(2015) Christopher C Chang et al.   GigaScience

The Evolutionary Truth About Living Fossils

(2014) William Shear et al.   AMERICAN SCIENTIST

Giant Pandas Are Not an Evolutionary cul-de-sac: Evidence from Multidisciplinary Research

(2014) F. Wei et al.   MOLECULAR BIOLOGY AND EVOLUTION

Inferring human population size and separation history from multiple genome sequences

(2014) Stephan Schiffels et al.   NATURE GENETICS

SweeD: Likelihood-Based Detection of Selective Sweeps in Thousands of Genomes

(2013) Pavlos Pavlidis et al.   MOLECULAR BIOLOGY AND EVOLUTION

Robust Demographic Inference from Genomic and SNP Data

(2013) Laurent Excoffier et al.   PLoS Genetics

Evidence for the persistence of wild Ginkgo biloba (Ginkgoaceae) populations in the Dalou Mountains, southwestern China

(2012) Cindy Q. Tang et al.   AMERICAN JOURNAL OF BOTANY

Too early to call it success: An evaluation of the natural regeneration of the endangered Metasequoia glyptostroboides

(2012) Yuan-Yuan Li et al.   BIOLOGICAL CONSERVATION

The Complete Chloroplast Genome of Ginkgo biloba Reveals the Mechanism of Inverted Repeat Contraction

(2012) Ching-Ping Lin et al.   Genome Biology and Evolution

Whole-genome sequencing of giant pandas provides insights into demographic history and local adaptation

(2012) Shancen Zhao et al.   NATURE GENETICS

Molecular data and ecological niche modelling reveal a highly dynamic evolutionary history of the East Asian Tertiary relict Cercidiphyllum (Cercidiphyllaceae)

(2012) Xin-Shuai Qi et al.   NEW PHYTOLOGIST

Centres of plant endemism in China: places for survival or for speciation?

(2011) Jordi López-Pujol et al.   JOURNAL OF BIOGEOGRAPHY

Plant molecular phylogeography in China and adjacent regions: Tracing the genetic imprints of Quaternary climate and environmental change in the world’s most diverse temperate flora

(2011) Ying-Xiong Qiu et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Inference of human population history from individual whole-genome sequences

(2011) Heng Li et al.   NATURE

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Cenozoic extinctions account for the low diversity of extant gymnosperms compared with angiosperms

(2011) Michael D. Crisp et al.   NEW PHYTOLOGIST

Recent Synchronous Radiation of a Living Fossil

(2011) N. S. Nagalingum et al.   SCIENCE

Population structure of relict Metasequoia glyptostroboides and its habitat fragmentation and degradation in south-central China

(2010) Cindy Q. Tang et al.   BIOLOGICAL CONSERVATION

Whole-genome resequencing reveals loci under selection during chicken domestication

(2010) Carl-Johan Rubin et al.   NATURE

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

An overview of fossil Ginkgoales

(2009) Zhi-Yan Zhou   Palaeoworld

Glacial Refugia ofGinkgo bilobaand Human Impact on Its Genetic Diversity: Evidence from Chloroplast DNA

(2008) Wei Gong et al.   Journal of Integrative Plant Biology

Phylogeography of a living fossil: Pleistocene glaciations forced Ginkgo biloba L. (Ginkgoaceae) into two refuge areas in China with limited subsequent postglacial expansion

(2008) Wei Gong et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION