Template‐based modeling by ClusPro in CASP13 and the potential for using co‐evolutionary information in docking
出版年份 2019 全文链接
标题
Template‐based modeling by ClusPro in CASP13 and the potential for using co‐evolutionary information in docking
作者
关键词
-
出版物
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
Volume 87, Issue 12, Pages 1241-1248
出版商
Wiley
发表日期
2019-08-25
DOI
10.1002/prot.25808
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- What method to use for protein–protein docking?
- (2019) Kathryn A Porter et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- ClusPro FMFT-SAXS: Ultra-fast Filtering Using Small-Angle X-ray Scattering Data in Protein Docking
- (2018) Mikhail Ignatov et al. JOURNAL OF MOLECULAR BIOLOGY
- A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core
- (2018) Lukas Zimmermann et al. JOURNAL OF MOLECULAR BIOLOGY
- ClusPro-DC: Dimer Classification by the Cluspro Server for Protein–Protein Docking
- (2017) Christine Yueh et al. JOURNAL OF MOLECULAR BIOLOGY
- The ClusPro web server for protein–protein docking
- (2017) Dima Kozakov et al. Nature Protocols
- New additions to the ClusPro server motivated by CAPRI
- (2017) Sandor Vajda et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- The challenge of modeling protein assemblies: the CASP12-CAPRI experiment
- (2017) Marc F. Lensink et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Accounting for pairwise distance restraints in FFT-based protein–protein docking
- (2016) Bing Xia et al. BIOINFORMATICS
- Cryo electron microscopy to determine the structure of macromolecular complexes
- (2016) Marta Carroni et al. METHODS
- Protein–protein docking by fast generalized Fourier transforms on 5D rotational manifolds
- (2016) Dzmitry Padhorny et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Modeling protein-protein and protein-peptide complexes: CAPRI 6th edition
- (2016) Marc F. Lensink et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Accounting for observed small angle X-ray scattering profile in the protein-protein docking server cluspro
- (2015) Bing Xia et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
- Updates to the Integrated Protein–Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2
- (2015) Thom Vreven et al. JOURNAL OF MOLECULAR BIOLOGY
- Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information
- (2014) Sergey Ovchinnikov et al. eLife
- Correction for Kamisetty et al., Assessing the utility of coevolution-based residue-residue contact predictions in a sequence- and structure-rich era
- (2013) PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Docking, scoring, and affinity prediction in CAPRI
- (2013) Marc F. Lensink et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Templates are available to model nearly all complexes of structurally characterized proteins
- (2012) P. J. Kundrotas et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- HHfrag: HMM-based fragment detection using HHpred
- (2011) Ivan Kalev et al. BIOINFORMATICS
- Protein-protein docking benchmark version 4.0
- (2010) Howook Hwang et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Learning generative models for protein fold families
- (2010) Sivaraman Balakrishnan et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- CHARMM: The biomolecular simulation program
- (2009) B. R. Brooks et al. JOURNAL OF COMPUTATIONAL CHEMISTRY
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