HHfrag: HMM-based fragment detection using HHpred

Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searching

(2011) Marcelo J. Berardi et al.   NATURE

Fragment-free approach to protein folding using conditional neural fields

(2010) F. Zhao et al.   BIOINFORMATICS

Structural Characteristics of Novel Protein Folds

(2010) Narcis Fernandez-Fuentes et al.   PLoS Computational Biology

PDBselect 1992–2009 and PDBfilter-select

(2009) Sven Griep et al.   NUCLEIC ACIDS RESEARCH

The GD box: A widespread noncontiguous supersecondary structural element

(2009) Vikram Alva et al.   PROTEIN SCIENCE

Fast and accurate automatic structure prediction with HHpred

(2009) Andrea Hildebrand et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Designing succinct structural alphabets

(2008) S. C. Li et al.   BIOINFORMATICS

Cradle-loop barrels and the concept of metafolds in protein classification by natural descent

(2008) Vikram Alva et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

A generative, probabilistic model of local protein structure

(2008) Wouter Boomsma et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA