标题
Deciphering essential cistromes using genome-wide CRISPR screens
作者
关键词
-
出版物
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 116, Issue 50, Pages 25186-25195
出版商
Proceedings of the National Academy of Sciences
发表日期
2019-11-15
DOI
10.1073/pnas.1908155116
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A Genome-wide Framework for Mapping Gene Regulation via Cellular Genetic Screens
- (2019) Molly Gasperini et al. CELL
- Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements
- (2019) Josh Tycko et al. Nature Communications
- Improved design and analysis of CRISPR knockout screens
- (2018) Chen-Hao Chen et al. BIOINFORMATICS
- Estrogen-regulated feedback loop limits the efficacy of estrogen receptor–targeted breast cancer therapy
- (2018) Tengfei Xiao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Synergistic drug combinations for cancer identified in a CRISPR screen for pairwise genetic interactions
- (2017) Kyuho Han et al. NATURE BIOTECHNOLOGY
- Variant-aware saturating mutagenesis using multiple Cas9 nucleases identifies regulatory elements at trait-associated loci
- (2017) Matthew C Canver et al. NATURE GENETICS
- A tiling-deletion-based genetic screen for cis-regulatory element identification in mammalian cells
- (2017) Yarui Diao et al. NATURE METHODS
- Combinatorial CRISPR–Cas9 screens for de novo mapping of genetic interactions
- (2017) John Paul Shen et al. NATURE METHODS
- Improved regulatory element prediction based on tissue-specific local epigenomic signatures
- (2017) Yupeng He et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome-scale deletion screening of human long non-coding RNAs using a paired-guide RNA CRISPR–Cas9 library
- (2016) Shiyou Zhu et al. NATURE BIOTECHNOLOGY
- High-throughput mapping of regulatory DNA
- (2016) Nisha Rajagopal et al. NATURE BIOTECHNOLOGY
- Functional genetic screens for enhancer elements in the human genome using CRISPR-Cas9
- (2016) Gozde Korkmaz et al. NATURE BIOTECHNOLOGY
- High-resolution interrogation of functional elements in the noncoding genome
- (2016) N. E. Sanjana et al. SCIENCE
- Systematic mapping of functional enhancer–promoter connections with CRISPR interference
- (2016) Charles P. Fulco et al. SCIENCE
- Genomic Copy Number Dictates a Gene-Independent Cell Response to CRISPR/Cas9 Targeting
- (2016) A. J. Aguirre et al. Cancer Discovery
- PEDLA: predicting enhancers with a deep learning-based algorithmic framework
- (2016) Feng Liu et al. Scientific Reports
- CTCF-Mediated Human 3D Genome Architecture Reveals Chromatin Topology for Transcription
- (2015) Zhonghui Tang et al. CELL
- High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities
- (2015) Traver Hart et al. CELL
- Insulator dysfunction and oncogene activation in IDH mutant gliomas
- (2015) William A. Flavahan et al. NATURE
- BCL11A enhancer dissection by Cas9-mediated in situ saturating mutagenesis
- (2015) Matthew C. Canver et al. NATURE
- CTCF/cohesin-binding sites are frequently mutated in cancer
- (2015) Riku Katainen et al. NATURE GENETICS
- DELTA: A Distal Enhancer Locating Tool Based on AdaBoost Algorithm and Shape Features of Chromatin Modifications
- (2015) Yiming Lu et al. PLoS One
- A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
- (2014) Suhas S.P. Rao et al. CELL
- Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells
- (2014) Xuebing Wu et al. NATURE BIOTECHNOLOGY
- CTCF: an architectural protein bridging genome topology and function
- (2014) Chin-Tong Ong et al. NATURE REVIEWS GENETICS
- CR Cistrome: a ChIP-Seq database for chromatin regulators and histone modification linkages in human and mouse
- (2013) Qixuan Wang et al. NUCLEIC ACIDS RESEARCH
- Landscape of transcription in human cells
- (2012) Sarah Djebali et al. NATURE
- The accessible chromatin landscape of the human genome
- (2012) Robert E. Thurman et al. NATURE
- Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer
- (2012) Christopher E Barbieri et al. NATURE GENETICS
- ChromHMM: automating chromatin-state discovery and characterization
- (2012) Jason Ernst et al. NATURE METHODS
- Cistrome: an integrative platform for transcriptional regulation studies
- (2011) Tao Liu et al. GENOME BIOLOGY
- Expression and Relevance of TRPS-1: A New GATA Transcription Factor in Breast Cancer
- (2011) Jie Qing Chen et al. Hormones & Cancer
- Growth factor stimulation induces a distinct ER cistrome underlying breast cancer endocrine resistance
- (2010) M. Lupien et al. GENES & DEVELOPMENT
- GREAT improves functional interpretation of cis-regulatory regions
- (2010) Cory Y McLean et al. NATURE BIOTECHNOLOGY
- The NIH Roadmap Epigenomics Mapping Consortium
- (2010) Bradley E Bernstein et al. NATURE BIOTECHNOLOGY
- CTCF: Master Weaver of the Genome
- (2009) Jennifer E. Phillips et al. CELL
- FoxA1 Translates Epigenetic Signatures into Enhancer-Driven Lineage-Specific Transcription
- (2008) Mathieu Lupien et al. CELL
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