标题
Genomic landscape of the global oak phylogeny
作者
关键词
-
出版物
NEW PHYTOLOGIST
Volume -, Issue -, Pages -
出版商
Wiley
发表日期
2019-10-14
DOI
10.1111/nph.16162
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Species diversification in a lineage of Mexican red oak (Quercus section Lobatae subsection Racemiflorae)—the interplay between distance, habitat, and hybridization
- (2019) Ross A. McCauley et al. Tree Genetics & Genomes
- Revised paleoaltimetry data show low Tibetan Plateau elevation during the Eocene
- (2019) Svetlana Botsyun et al. SCIENCE
- Central American climate and microrefugia: A view from the last interglacial
- (2019) G.M. Cárdenes-Sandí et al. QUATERNARY SCIENCE REVIEWS
- Uncovering the genomic signature of ancient introgression between white oak lineages ( Quercus )
- (2019) Andrew A. Crowl et al. NEW PHYTOLOGIST
- East Asian origins of European holly oaks ( Quercus section Ilex Loudon) via the Tibet‐Himalaya
- (2019) Xiao‐Long Jiang et al. JOURNAL OF BIOGEOGRAPHY
- Massive postglacial gene flow between European white oaks uncovered genes underlying species barriers
- (2019) Thibault Leroy et al. NEW PHYTOLOGIST
- Adaptive introgression as a driver of local adaptation to climate in European white oaks
- (2019) Thibault Leroy et al. NEW PHYTOLOGIST
- The role of diversification in community assembly of the oaks (Quercus L.) across the continental U.S.
- (2018) Jeannine Cavender-Bares et al. AMERICAN JOURNAL OF BOTANY
- New prospects in the detection and comparative analysis of hybridization in the tree of life
- (2018) Ryan A. Folk et al. AMERICAN JOURNAL OF BOTANY
- Cenozoic magmatism and extension in western Mexico: Linking the Sierra Madre Occidental silicic large igneous province and the Comondú Group with the Gulf of California rift
- (2018) Luca Ferrari et al. EARTH-SCIENCE REVIEWS
- Phylogeny and biogeography of East Asian evergreen oaks ( Quercus section Cyclobalanopsis ; Fagaceae): Insights into the Cenozoic history of evergreen broad-leaved forests in subtropical Asia
- (2018) Min Deng et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Inferring Phylogenetic Networks Using PhyloNet
- (2018) Dingqiao Wen et al. SYSTEMATIC BIOLOGY
- A nuclear DNA barcode for eastern North American oaks and application to a study of hybridization in an Arboretum setting
- (2018) Elisabeth Fitzek et al. Ecology and Evolution
- The draft genome sequence of cork oak
- (2018) António Marcos Ramos et al. Scientific Data
- RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercus sect. Quercus : Fagaceae)
- (2018) Bernard Y. Kim et al. MOLECULAR ECOLOGY
- Diversification, adaptation, and community assembly of the American oaks (Quercus ), a model clade for integrating ecology and evolution
- (2018) Jeannine Cavender-Bares NEW PHYTOLOGIST
- Exploring the potential of gametic reconstruction of parental genotypes by F1 hybrids as a bridge for rapid introgression
- (2017) Charles H. Cannon et al. GENOME
- A time and a place for everything: phylogenetic history and geography as joint predictors of oak plastome phylogeny
- (2017) Kasey K. Pham et al. GENOME
- Phylogenomics reveals a complex evolutionary history of lobed-leaf white oaks in western North America
- (2017) John D. McVay et al. GENOME
- Phylogenomic inferences from reference-mapped and de novo assembled short-read sequence data using RADseq sequencing of California white oaks (Quercus section Quercus)
- (2017) Sorel Fitz-Gibbon et al. GENOME
- PhyloNetworks: A Package for Phylogenetic Networks
- (2017) Claudia Solís-Lemus et al. MOLECULAR BIOLOGY AND EVOLUTION
- Bayesian Inference of Species Networks from Multilocus Sequence Data
- (2017) Chi Zhang et al. MOLECULAR BIOLOGY AND EVOLUTION
- Genomic data reveal cryptic lineage diversification and introgression in Californian golden cup oaks (section Protobalanus )
- (2017) Joaquín Ortego et al. NEW PHYTOLOGIST
- Extensive recent secondary contacts between four European white oak species
- (2017) Thibault Leroy et al. NEW PHYTOLOGIST
- Sympatric parallel diversification of major oak clades in the Americas and the origins of Mexican species diversity
- (2017) Andrew L. Hipp et al. NEW PHYTOLOGIST
- A genetic legacy of introgression confounds phylogeny and biogeography in oaks
- (2017) John D. McVay et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Topology of syngameons
- (2017) William J. Boecklen Ecology and Evolution
- The evolution of methods for establishing evolutionary timescales
- (2016) Philip C. J. Donoghue et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Species relationships and divergence times in beeches: new insights from the inclusion of 53 young and old fossils in a birth–death clock model
- (2016) S. S. Renner et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Specimens at the Center: An Informatics Workflow and Toolkit for Specimen-level Analysis of Public DNA Database Data
- (2016) et al. SYSTEMATIC BOTANY
- First Draft Assembly and Annotation of the Genome of a California Endemic Oak Quercus lobata Nee (Fagaceae)
- (2016) V. L. Sork et al. G3-Genes Genomes Genetics
- Inferring Phylogenetic Networks with Maximum Pseudolikelihood under Incomplete Lineage Sorting
- (2016) Claudia Solís-Lemus et al. PLoS Genetics
- Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants
- (2015) Stephen A Smith et al. BMC EVOLUTIONARY BIOLOGY
- Substantial genome synteny preservation among woody angiosperm species: comparative genomics of Chinese chestnut (Castanea mollissima) and plant reference genomes
- (2015) Margaret Staton et al. BMC GENOMICS
- Historical introgression among the American live oaks and the comparative nature of tests for introgression
- (2015) Deren A. R. Eaton et al. EVOLUTION
- How Are Oaks Distributed in the Neotropics? A Perspective from Species Turnover, Areas of Endemism, and Climatic Niches
- (2015) Hernando Rodríguez-Correa et al. INTERNATIONAL JOURNAL OF PLANT SCIENCES
- Phylogeny and biogeography of the American live oaks (QuercussubsectionVirentes): a genomic and population genetics approach
- (2015) Jeannine Cavender-Bares et al. MOLECULAR ECOLOGY
- Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies
- (2015) Christophe Plomion et al. Molecular Ecology Resources
- Variable mating behaviors and the maintenance of tropical biodiversity
- (2015) Charles H. Cannon et al. Frontiers in Genetics
- PyRAD: assembly of de novo RADseq loci for phylogenetic analyses
- (2014) Deren A. R. Eaton BIOINFORMATICS
- tqDist: a library for computing the quartet and triplet distances between binary or general trees
- (2014) Andreas Sand et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Fagaceae pollen from the early Cenozoic of West Greenland: revisiting Engler’s and Chaney’s Arcto-Tertiary hypotheses
- (2014) Friðgeir Grímsson et al. PLANT SYSTEMATICS AND EVOLUTION
- Automatic Detection of Key Innovations, Rate Shifts, and Diversity-Dependence on Phylogenetic Trees
- (2014) Daniel L. Rabosky PLoS One
- A Framework Phylogeny of the American Oak Clade Based on Sequenced RAD Data
- (2014) Andrew L. Hipp et al. PLoS One
- Multiple nuclear genes stabilize the phylogenetic backbone of the genusQuercus
- (2014) François Hubert et al. SYSTEMATICS AND BIODIVERSITY
- De novo sequencing of sunflower genome for SNP discovery using RAD (Restriction site Associated DNA) approach
- (2013) Venkatramana Pegadaraju et al. BMC GENOMICS
- Ultrafast Approximation for Phylogenetic Bootstrap
- (2013) B. Q. Minh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Molecular dating of phylogenies by likelihood methods: A comparison of models and a new information criterion
- (2013) Emmanuel Paradis MOLECULAR PHYLOGENETICS AND EVOLUTION
- New Approaches to the Biogeography and Areas of Endemism of Red Oaks (Quercus L., Section Lobatae)
- (2013) Andrés Torres-Miranda et al. SYSTEMATIC BIOLOGY
- Trichome types, foliar indumentum and epicuticular wax in the Mediterranean gall oaks, Quercus subsection Galliferae (Fagaceae): implications for taxonomy, ecology and evolution
- (2012) GEORG F. TSCHAN et al. BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- The age and diversification of terrestrial New World ecosystems through Cretaceous and Cenozoic time
- (2011) A. Graham AMERICAN JOURNAL OF BOTANY
- Conservation biogeography of red oaks (Quercus , section Lobatae ) in Mexico and Central America
- (2011) Andrés Torres-Miranda et al. AMERICAN JOURNAL OF BOTANY
- Two highly validated multiplexes (12-plex and 8-plex) for species delimitation and parentage analysis in oaks (Quercus spp.)
- (2011) E. GUICHOUX et al. Molecular Ecology Resources
- A new terrestrial palynoflora from the Palaeocene/Eocene boundary in the northwestern Tethyan realm (St. Pankraz, Austria)
- (2011) Christa-Ch. Hofmann et al. REVIEW OF PALAEOBOTANY AND PALYNOLOGY
- Episodic migration of oaks to Iceland: Evidence for a North Atlantic “land bridge” in the latest Miocene
- (2010) Thomas Denk et al. AMERICAN JOURNAL OF BOTANY
- Bats of Northwestern Durango, Mexico: Species Richness at the Interface of Two Biogeographic Regions
- (2010) Laura Torres-Morales et al. SOUTHWESTERN NATURALIST
- BLAST+: architecture and applications
- (2009) Christiam Camacho et al. BMC BIOINFORMATICS
- Significance of Pollen Characteristics for Infrageneric Classification and Phylogeny in Quercus (Fagaceae)
- (2009) Thomas Denk et al. INTERNATIONAL JOURNAL OF PLANT SCIENCES
- Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
- (2008) Nathan A. Baird et al. PLoS One
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More