Enhancing Upland cotton for drought resilience, productivity, and fiber quality: comparative evaluation and genetic dissection

Exploring ethyl methanesulfonate (EMS) treated cotton (Gossypium hirsutum L.) to improve drought tolerance

(2018) Travis W. Witt et al.   EUPHYTICA

Resequencing a core collection of upland cotton identifies genomic variation and loci influencing fiber quality and yield

(2018) Zhiying Ma et al.   NATURE GENETICS

Genetic Map Construction and Fiber Quality QTL Mapping Using the CottonSNP80K Array in Upland Cotton

(2018) Zhaoyun Tan et al.   Frontiers in Plant Science

Identification of Introgressed Alleles Conferring High Fiber Quality Derived From Gossypium barbadense L. in Secondary Mapping Populations of G. hirsutum L.

(2018) Yu Chen et al.   Frontiers in Plant Science

Emerging trends in global freshwater availability

(2018) M. Rodell et al.   NATURE

Progress and perspective on drought and salt stress tolerance in cotton

(2018) Abdelraheem Abdelraheem et al.   INDUSTRIAL CROPS AND PRODUCTS

A meta-analysis of quantitative trait loci for abiotic and biotic stress resistance in tetraploid cotton

(2017) Abdelraheem Abdelraheem et al.   MOLECULAR GENETICS AND GENOMICS

A global survey of alternative splicing in allopolyploid cotton: landscape, complexity and regulation

(2017) Maojun Wang et al.   NEW PHYTOLOGIST

Genome-wide association study discovered genetic variation and candidate genes of fibre quality traits in Gossypium hirsutum L.

(2017) Zhengwen Sun et al.   PLANT BIOTECHNOLOGY JOURNAL

QTLs Analysis and Validation for Fiber Quality Traits Using Maternal Backcross Population in Upland Cotton

(2017) Lingling Ma et al.   Frontiers in Plant Science

Identification of stable quantitative trait loci (QTLs) for fiber quality traits across multiple environments in Gossypium hirsutum recombinant inbred line population

(2016) Muhammad Jamshed et al.   BMC GENOMICS

Mapping by sequencing in cotton (Gossypium hirsutum) line MD52ne identified candidate genes for fiber strength and its related quality attributes

(2016) Md. S. Islam et al.   THEORETICAL AND APPLIED GENETICS

Genetic Analysis and QTL Detection on Fiber Traits Using Two Recombinant Inbred Lines and Their Backcross Populations in Upland Cotton

(2016) Lianguang Shang et al.   G3-Genes Genomes Genetics

Identification of QTL for Fiber Quality and Yield Traits Using Two Immortalized Backcross Populations in Upland Cotton

(2016) Hantao Wang et al.   PLoS One

Cotton QTLdb: a cotton QTL database for QTL analysis, visualization, and comparison between Gossypium hirsutum and G. hirsutum × G. barbadense populations

(2015) Joseph I Said et al.   MOLECULAR GENETICS AND GENOMICS

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement

(2015) Tianzhen Zhang et al.   NATURE BIOTECHNOLOGY

Genetic mechanisms of abiotic stress tolerance that translate to crop yield stability

(2015) Michael V. Mickelbart et al.   NATURE REVIEWS GENETICS

Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium spp.

(2015) A. M. Hulse-Kemp et al.   G3-Genes Genomes Genetics

QTL Mapping for Fiber and Yield Traits in Upland Cotton under Multiple Environments

(2015) Hantao Wang et al.   PLoS One

Optimizing Irrigation and Plant Density for Improved Cotton Yield and Fiber Quality

(2014) Lu Feng et al.   AGRONOMY JOURNAL

Quantitative trait loci analysis of fiber quality traits using a random-mated recombinant inbred population in Upland cotton (Gossypium hirsutum L.)

(2014) David D Fang et al.   BMC GENOMICS

Molecular confirmation of species status for the allopolyploid cotton species, Gossypium ekmanianum Wittmack

(2014) C. E. Grover et al.   GENETIC RESOURCES AND CROP EVOLUTION

Mapping genomic loci for cotton plant architecture, yield components, and fiber properties in an interspecific (Gossypium hirsutum L. × G. barbadense L.) RIL population

(2014) John Z. Yu et al.   MOLECULAR GENETICS AND GENOMICS

A comparative meta-analysis of QTL between intraspecific Gossypium hirsutum and interspecific G. hirsutum × G. barbadense populations

(2014) Joseph I. Said et al.   MOLECULAR GENETICS AND GENOMICS

Multiple Irrigation Levels Affect Boll Distribution, Yield, and Fiber Micronaire in Cotton

(2013) Chase Snowden et al.   AGRONOMY JOURNAL

A comprehensive meta QTL analysis for fiber quality, yield, yield related and morphological traits, drought tolerance, and disease resistance in tetraploid cotton

(2013) Joseph I Said et al.   BMC GENOMICS

Genetic diversity and population structure of cotton (Gossypium spp.) of the New World assessed by SSR markers

(2013) Mauricio Ulloa et al.   Botany

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres

(2012) Andrew H. Paterson et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

RNAi-mediated Ultra-low gossypol cottonseed trait: performance of transgenic lines under field conditions

(2012) Sreenath R. Palle et al.   PLANT BIOTECHNOLOGY JOURNAL

A High-Density Simple Sequence Repeat and Single Nucleotide Polymorphism Genetic Map of the Tetraploid Cotton Genome

(2012) John Z. Yu et al.   G3-Genes Genomes Genetics

Genome structure of cotton revealed by a genome-wide SSR genetic map constructed from a BC1 population between gossypium hirsutum and G. barbadense

(2011) Yu Yu et al.   BMC GENOMICS

Plant breeding for harmony between agriculture and the environment

(2011) E Charles Brummer et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Meta-analysis of cotton fiber quality QTLs across diverse environments in a Gossypium hirsutum x G. barbadense RIL population

(2010) Jean-Marc Lacape et al.   BMC PLANT BIOLOGY

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Every genome sequence needs a good map

(2009) H. A. Lewin et al.   GENOME RESEARCH