Conformational flexibility of adenine riboswitch aptamer in apo and bound states using NMR and an X-ray free electron laser

Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography

(2017) J. R. Stagno et al.   NATURE

Ligand-modulated folding of the full-length adenine riboswitch probed by NMR and single-molecule FRET spectroscopy

(2017) Sven Warhaut et al.   NUCLEIC ACIDS RESEARCH

Ligand-Induced Stabilization of a Duplex-like Architecture Is Crucial for the Switching Mechanism of the SAM-III Riboswitch

(2016) Gorle Suresh et al.   BIOCHEMISTRY

Cooperativity, allostery and synergism in ligand binding to riboswitches

(2015) Alla Peselis et al.   BIOCHIMIE

Kissing loop interaction in adenine riboswitch: insights from umbrella sampling simulations

(2015) Francesco Di Palma et al.   BMC BIOINFORMATICS

Synthesis and applications of RNAs with position-selective labelling and mosaic composition

(2015) Yu Liu et al.   NATURE

Integrated description of protein dynamics from room-temperature X-ray crystallography and NMR

(2014) R. B. Fenwick et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The importance of helix P1 stability for structural pre-organization and ligand binding affinity of the adenine riboswitch aptamer domain

(2014) Senada Nozinovic et al.   RNA Biology

Cheetah: software for high-throughput reduction and analysis of serial femtosecond X-ray diffraction data

(2014) Anton Barty et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Fast and accurate fitting of relaxation dispersion data using the flexible software package GLOVE

(2013) Kenji Sugase et al.   JOURNAL OF BIOMOLECULAR NMR

Three-state mechanism couples ligand and temperature sensing in riboswitches

(2013) Anke Reining et al.   NATURE

Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution

(2013) Andrea Haller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Loop-loop interaction in an adenine-sensing riboswitch: A molecular dynamics study

(2013) O. Allner et al.   RNA

Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch

(2013) F. Di Palma et al.   RNA

CrystFEL: a software suite for snapshot serial crystallography

(2012) Thomas A. White et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Role of Ligand Binding in Structural Organization ofAddA-riboswitch Aptamer: A Molecular Dynamics Simulation

(2012) Zhou Gong et al.   JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS

Structure and mechanism of purine-binding riboswitches

(2012) Robert T. Batey   QUARTERLY REVIEWS OF BIOPHYSICS

Overview of theCCP4 suite and current developments

(2011) Martyn D. Winn et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch

(2011) L. Huang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Real-time multidimensional NMR follows RNA folding with second resolution

(2010) M.-K. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Method for Helical RNA Global Structure Determination in Solution Using Small-Angle X-Ray Scattering and NMR Measurements

(2009) Jinbu Wang et al.   JOURNAL OF MOLECULAR BIOLOGY

Role of the Adenine Ligand on the Stabilization of the Secondary and Tertiary Interactions in the Adenine Riboswitch

(2009) U. Deva Priyakumar et al.   JOURNAL OF MOLECULAR BIOLOGY

MD simulations of ligand-bound and ligand-free aptamer: Molecular level insights into the binding and switching mechanism of the add A-riboswitch

(2009) M. Sharma et al.   RNA

Analyzing the Flexibility of RNA Structures by Constraint Counting

(2008) Simone Fulle et al.   BIOPHYSICAL JOURNAL