The Green Revolution shaped the population structure of the rice pathogen Xanthomonas oryzae pv. oryzae
出版年份 2019 全文链接
标题
The Green Revolution shaped the population structure of the rice pathogen Xanthomonas oryzae pv. oryzae
作者
关键词
-
出版物
ISME Journal
Volume -, Issue -, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2019-10-31
DOI
10.1038/s41396-019-0545-2
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Genome-Wide Detection of Genes Under Positive Selection in Worldwide Populations of the Barley Scald Pathogen
- (2018) Norfarhan Mohd-Assaad et al. Genome Biology and Evolution
- Genome-wide evidence for divergent selection between populations of a major agricultural pathogen
- (2018) Fanny E. Hartmann et al. MOLECULAR ECOLOGY
- IR64: a high-quality and high-yielding mega variety
- (2018) David J. Mackill et al. Rice
- A phylogenetic method to perform genome-wide association studies in microbes that accounts for population structure and recombination
- (2018) Caitlin Collins et al. PLoS Computational Biology
- Piggy: a rapid, large-scale pan-genome analysis tool for intergenic regions in bacteria
- (2018) Harry A Thorpe et al. GigaScience
- Genomic Inference of Recombination-Mediated Evolution in Xanthomonas euvesicatoria and X. perforans
- (2018) Mustafa O. Jibrin et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Genomic variation in 3,010 diverse accessions of Asian cultivated rice
- (2018) Wensheng Wang et al. NATURE
- Natural variations in the promoter of OsSWEET13 and OsSWEET14 expand the range of resistance against Xanthomonas oryzae pv. oryzae
- (2018) Abha Zaka et al. PLoS One
- A Strain of an Emerging Indian Xanthomonas oryzae pv. oryzae Pathotype Defeats the Rice Bacterial Blight Resistance Gene xa13 Without Inducing a Clade III SWEET Gene and Is Nearly Identical to a Recent Thai Isolate
- (2018) Sara C. D. Carpenter et al. Frontiers in Microbiology
- Evolution of Transcription Activator-Like Effectors in Xanthomonas oryzae
- (2017) Annett Erkes et al. Genome Biology and Evolution
- Population genomic insights into variation and evolution of Xanthomonas oryzae pv. oryzae
- (2017) Samriti Midha et al. Scientific Reports
- Plant-Pathogen Effectors: Cellular Probes Interfering with Plant Defenses in Spatial and Temporal Manners
- (2016) Tania Y. Toruño et al. Annual Review of Phytopathology
- ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data
- (2016) Guangchuang Yu et al. Methods in Ecology and Evolution
- AnnoTALE: bioinformatics tools for identification, annotation and nomenclature of TALEs from Xanthomonas genomic sequences
- (2016) Jan Grau et al. Scientific Reports
- Effector Diversification Contributes to Xanthomonas oryzae pv. oryzae Phenotypic Adaptation in a Semi-Isolated Environment
- (2016) Ian Lorenzo Quibod et al. Scientific Reports
- IonGAP: integrative bacterial genome analysis for Ion Torrent sequence data
- (2015) Adrian Baez-Ortega et al. BIOINFORMATICS
- Roary: rapid large-scale prokaryote pan genome analysis
- (2015) Andrew J. Page et al. BIOINFORMATICS
- Fusarium Wilt of Banana
- (2015) Randy C. Ploetz PHYTOPATHOLOGY
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes
- (2015) Xavier Didelot et al. PLoS Computational Biology
- New Multilocus Variable-Number Tandem-Repeat Analysis Tool for Surveillance and Local Epidemiology of Bacterial Leaf Blight and Bacterial Leaf Streak of Rice Caused by Xanthomonas oryzae
- (2014) L. Poulin et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Prokka: rapid prokaryotic genome annotation
- (2014) T. Seemann BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- Durable resistance: A key to sustainable management of pathogens and pests
- (2014) Christopher C. Mundt INFECTION GENETICS AND EVOLUTION
- PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R
- (2014) Bastian Pfeifer et al. MOLECULAR BIOLOGY AND EVOLUTION
- SNP-Seek database of SNPs derived from 3000 rice genomes
- (2014) Nickolai Alexandrov et al. NUCLEIC ACIDS RESEARCH
- QUAST: quality assessment tool for genome assemblies
- (2013) Alexey Gurevich et al. BIOINFORMATICS
- Diverse Functions of Restriction-Modification Systems in Addition to Cellular Defense
- (2013) K. Vasu et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- FUBAR: A Fast, Unconstrained Bayesian AppRoximation for Inferring Selection
- (2013) B. Murrell et al. MOLECULAR BIOLOGY AND EVOLUTION
- Hierarchical and Spatially Explicit Clustering of DNA Sequences with BAPS Software
- (2013) L. Cheng et al. MOLECULAR BIOLOGY AND EVOLUTION
- The evolution of plant pathogens in response to host resistance: Factors affecting the gain from deployment of qualitative and quantitative resistance
- (2012) Giovanni Lo Iacono et al. JOURNAL OF THEORETICAL BIOLOGY
- Bayesian Phylogenetics with BEAUti and the BEAST 1.7
- (2012) Alexei J. Drummond et al. MOLECULAR BIOLOGY AND EVOLUTION
- clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
- (2012) Guangchuang Yu et al. OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY
- The Emergence of Ug99 Races of the Stem Rust Fungus is a Threat to World Wheat Production
- (2011) Ravi P. Singh et al. Annual Review of Phytopathology
- HrpG and HrpX Play Global Roles in Coordinating Different Virulence Traits ofXanthomonas axonopodispv.citri
- (2011) Yinping Guo et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Spatial variation in disease resistance: from molecules to metapopulations
- (2010) Anna-Liisa Laine et al. JOURNAL OF ECOLOGY
- ABACAS: algorithm-based automatic contiguation of assembled sequences
- (2009) S. Assefa et al. BIOINFORMATICS
- High-throughput functional annotation and data mining with the Blast2GO suite
- (2008) S. Gotz et al. NUCLEIC ACIDS RESEARCH
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