Evolution of Transcription Activator-Like Effectors in Xanthomonas oryzae

Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

Efficiency of integron cassette insertion in correct orientation is ensured by the interplay of the three unpaired features ofattCrecombination sites

(2016) Aleksandra Nivina et al.   NUCLEIC ACIDS RESEARCH

Translation quality control is critical for bacterial responses to amino acid stress

(2016) Tammy J. Bullwinkle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interfering TAL effectors of Xanthomonas oryzae neutralize R-gene-mediated plant disease resistance

(2016) Zhiyuan Ji et al.   Nature Communications

AnnoTALE: bioinformatics tools for identification, annotation and nomenclature of TALEs from Xanthomonas genomic sequences

(2016) Jan Grau et al.   Scientific Reports

Effector Diversification Contributes to Xanthomonas oryzae pv. oryzae Phenotypic Adaptation in a Semi-Isolated Environment

(2016) Ian Lorenzo Quibod et al.   Scientific Reports

DiffLogo: a comparative visualization of sequence motifs

(2015) Martin Nettling et al.   BMC BIOINFORMATICS

Accuracy of initial codon selection by aminoacyl-tRNAs on the mRNA-programmed bacterial ribosome

(2015) Jingji Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Five phylogenetically close riceSWEETgenes confer TAL effector-mediated susceptibility toXanthomonas oryzaepv.oryzae

(2013) Jana Streubel et al.   NEW PHYTOLOGIST

Computational Predictions Provide Insights into the Biology of TAL Effector Target Sites

(2013) Jan Grau et al.   PLoS Computational Biology

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

Genomic Analysis of Xanthomonas oryzae Isolates from Rice Grown in the United States Reveals Substantial Divergence from Known X. oryzae Pathovars

(2011) L. R. Triplett et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors

(2009) J. Boch et al.   SCIENCE

A Simple Cipher Governs DNA Recognition by TAL Effectors

(2009) M. J. Moscou et al.   SCIENCE

Genome sequence and rapid evolution of the rice pathogen Xanthomonas oryzae pv. oryzae PXO99A

(2008) Steven L Salzberg et al.   BMC GENOMICS