Escherichia coli B2 Phylogenetic Subgroups in the Infant Gut Microbiota: Predominance of Uropathogenic Lineages in Swedish Infants and Enteropathogenic Lineages in Pakistani Infants

Rapid and simple universal Escherichia coli genotyping method based on Multiple-Locus Variable-Number of Tandem Repeats Analysis using single-tube multiplex PCR and standard gel electrophoresis

(2019) François Caméléna et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Association of virulence factors, phylogenetic groups and antimicrobial resistance markers in Escherichia coli from Badin city, Pakistan

(2016) Neeraj Kumar et al.   JOURNAL OF CHEMOTHERAPY

Phylogenetic, virulence and antibiotic resistance characteristics of commensal strain populations of Escherichia coli from community subjects in the Paris area in 2010 and evolution over 30 years

(2016) Méril Massot et al.   MICROBIOLOGY-SGM

Characterization of enteropathogenicEscherichia coliof clinical origin from the pediatric population in Pakistan

(2016) Mahwish Younas et al.   TRANSACTIONS OF THE ROYAL SOCIETY OF TROPICAL MEDICINE AND HYGIENE

Genomic diversity of EPEC associated with clinical presentations of differing severity

(2016) Tracy H. Hazen et al.   Nature Microbiology

Enteropathogenic Escherichia coli: foe or innocent bystander?

(2015) J. Hu et al.   CLINICAL MICROBIOLOGY AND INFECTION

Guide to the various phylogenetic classification schemes for Escherichia coli and the correspondence among schemes

(2015) Olivier Clermont et al.   MICROBIOLOGY-SGM

Pandemic lineages of extraintestinal pathogenic Escherichia coli

(2014) L.W. Riley   CLINICAL MICROBIOLOGY AND INFECTION

Development of an allele-specific PCR for Escherichia coli B2 sub-typing, a rapid and easy to perform substitute of multilocus sequence typing

(2014) Olivier Clermont et al.   JOURNAL OF MICROBIOLOGICAL METHODS

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

The ClermontEscherichia coliphylo-typing method revisited: improvement of specificity and detection of new phylo-groups

(2012) Olivier Clermont et al.   Environmental Microbiology Reports

Virulence profile of different phylogenetic groups of locally isolated community acquired uropathogenic E. coli from Faisalabad region of Pakistan

(2012) Saira Bashir et al.   Annals of Clinical Microbiology and Antimicrobials

Pathogenicity Island Markers, Virulence DeterminantsmalXandusp, and the Capacity ofEscherichia coliTo Persist in Infants' Commensal Microbiotas

(2011) Anna Östblom et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Animal and human pathogenic Escherichia coli strains share common genetic backgrounds

(2011) Olivier Clermont et al.   INFECTION GENETICS AND EVOLUTION

Sequence types and plasmid carriage of uropathogenic Escherichia coli devoid of phenotypically detectable resistance

(2011) S. Bengtsson et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Population structure, virulence potential and antibiotic susceptibility of uropathogenic Escherichia coli from Northwest England

(2011) T. M. Gibreel et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

The population genetics of commensal Escherichia coli

(2010) Olivier Tenaillon et al.   NATURE REVIEWS MICROBIOLOGY

Phylogenetic group B2 Escherichia coli strains from the bowel microbiota of Pakistani infants carry few virulence genes and lack the capacity for long-term persistence

(2009) F.L. Nowrouzian et al.   CLINICAL MICROBIOLOGY AND INFECTION

Pathogenic agents in inflammatory bowel diseases

(2009) Guillaume Pineton de Chambrun et al.   CURRENT OPINION IN GASTROENTEROLOGY

Semi-automated rep-PCR for rapid differentiation of major clonal groups of Escherichia coli meningitis strains

(2009) Stéphane Bonacorsi et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Role of Intraspecies Recombination in the Spread of Pathogenicity Islands within the Escherichia coli Species

(2009) Sören Schubert et al.   PLoS Pathogens