标题
Chromosomal rearrangements as a source of new gene formation in Drosophila yakuba
作者
关键词
Invertebrate genomics, Gene expression, Chromosome mapping, X chromosomes, Chromosome pairs, Population genetics, Drosophila melanogaster, Testes
出版物
PLoS Genetics
Volume 15, Issue 9, Pages e1008314
出版商
Public Library of Science (PLoS)
发表日期
2019-09-24
DOI
10.1371/journal.pgen.1008314
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Hidden genetic variation shapes the structure of functional elements in Drosophila
- (2017) Mahul Chakraborty et al. NATURE GENETICS
- Tandem duplications lead to novel expression patterns through exon shuffling in Drosophila yakuba
- (2017) Rebekah L. Rogers et al. PLoS Genetics
- Regulatory activities of transposable elements: from conflicts to benefits
- (2016) Edward B. Chuong et al. NATURE REVIEWS GENETICS
- Variation in the X:Autosome Distribution of Male-Biased Genes amongDrosophila melanogasterTissues and Its Relationship with Dosage Compensation
- (2015) Ann Kathrin Huylmans et al. Genome Biology and Evolution
- Genes from scratch – the evolutionary fate of de novo genes
- (2015) Christian Schlötterer TRENDS IN GENETICS
- Landscape of Standing Variation for Tandem Duplications in Drosophila yakuba and Drosophila simulans
- (2014) Rebekah L. Rogers et al. MOLECULAR BIOLOGY AND EVOLUTION
- Origin and Spread of de Novo Genes in Drosophila melanogaster Populations
- (2014) L. Zhao et al. SCIENCE
- Revised Annotations, Sex-Biased Expression, and Lineage-Specific Genes in the Drosophila melanogaster Group
- (2014) Rebekah L. Rogers et al. G3-Genes Genomes Genetics
- Abundance and Distribution of Transposable Elements in Two Drosophila QTL Mapping Resources
- (2013) Julie M. Cridland et al. MOLECULAR BIOLOGY AND EVOLUTION
- Neofunctionalization of young duplicate genes in Drosophila
- (2013) R. Assis et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Gene alterations at Drosophila inversion breakpoints provide prima facie evidence for natural selection as an explanation for rapid chromosomal evolution
- (2012) Yolanda Guillén et al. BMC GENOMICS
- Proto-genes and de novo gene birth
- (2012) Anne-Ruxandra Carvunis et al. NATURE
- The Drosophila melanogaster Genetic Reference Panel
- (2012) Trudy F. C. Mackay et al. NATURE
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
- (2012) Cole Trapnell et al. Nature Protocols
- Structural mutations in cancer: mechanistic and functional insights
- (2012) Koichiro Inaki et al. TRENDS IN GENETICS
- A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
- (2011) H. Li BIOINFORMATICS
- Chimeric Genes as a Source of Rapid Evolution in Drosophila melanogaster
- (2011) R. L. Rogers et al. MOLECULAR BIOLOGY AND EVOLUTION
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Successive Increases in the Resistance of Drosophila to Viral Infection through a Transposon Insertion Followed by a Duplication
- (2011) Michael M. Magwire et al. PLoS Genetics
- Drosophila Duplication Hotspots Are Associated with Late-Replicating Regions of the Genome
- (2011) Margarida Cardoso-Moreira et al. PLoS Genetics
- TopHat-Fusion: an algorithm for discovery of novel fusion transcripts
- (2011) Daehwan Kim et al. GENOME BIOLOGY
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
- Evidence that Adaptation in Drosophila Is Not Limited by Mutation at Single Sites
- (2010) Talia Karasov et al. PLoS Genetics
- Copy Number Variation and Transposable Elements Feature in Recent, Ongoing Adaptation at the Cyp6g1 Locus
- (2010) Joshua M. Schmidt et al. PLoS Genetics
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- The impact of genomic neighborhood on the evolution of human and chimpanzee transcriptome
- (2009) S. De et al. GENOME RESEARCH
- Darwinian alchemy: Human genes from noncoding DNA
- (2009) A. Siepel GENOME RESEARCH
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- Formation and Longevity of Chimeric and Duplicate Genes in Drosophila melanogaster
- (2008) R. L. Rogers et al. GENETICS
- On the origin of new genes in Drosophila
- (2008) Q. Zhou et al. GENOME RESEARCH
- Genetic association analysis of copy-number variation (CNV) in human disease pathogenesis
- (2008) Iuliana Ionita-Laza et al. GENOMICS
- Cytogenetic determinants of male fertility
- (2008) R.H. Martin HUMAN REPRODUCTION UPDATE
- The amphioxus genome and the evolution of the chordate karyotype
- (2008) Nicholas H. Putnam et al. NATURE
- Turning a hobby into a job: How duplicated genes find new functions
- (2008) Gavin C. Conant et al. NATURE REVIEWS GENETICS
- Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
- (2008) Da Wei Huang et al. NUCLEIC ACIDS RESEARCH
- Adaptation from standing genetic variation
- (2007) R BARRETT et al. TRENDS IN ECOLOGY & EVOLUTION
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