标题
TopHat-Fusion: an algorithm for discovery of novel fusion transcripts
作者
关键词
-
出版物
GENOME BIOLOGY
Volume 12, Issue 8, Pages R72
出版商
Springer Nature
发表日期
2011-08-12
DOI
10.1186/gb-2011-12-8-r72
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Sensitive gene fusion detection using ambiguously mapping RNA-Seq read pairs
- (2011) Marcus Kinsella et al. BIOINFORMATICS
- FusionMap: detecting fusion genes from next-generation sequencing data at base-pair resolution
- (2011) Huanying Ge et al. BIOINFORMATICS
- deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data
- (2011) Andrew McPherson et al. PLoS Computational Biology
- From RNA-seq reads to differential expression results
- (2011) Alicia Oshlack et al. GENOME BIOLOGY
- Identification of fusion genes in breast cancer by paired-end RNA-sequencing
- (2011) Henrik Edgren et al. GENOME BIOLOGY
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- De novo assembly and analysis of RNA-seq data
- (2010) Gordon Robertson et al. NATURE METHODS
- FusionSeq: a modular framework for finding gene fusions by analyzing Paired-End RNA-Sequencing data
- (2010) Andrea Sboner et al. GENOME BIOLOGY
- Global and unbiased detection of splice junctions from RNA-seq data
- (2010) Adam Ameur et al. GENOME BIOLOGY
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- ABySS: A parallel assembler for short read sequence data
- (2009) J. T. Simpson et al. GENOME RESEARCH
- Transcriptome sequencing to detect gene fusions in cancer
- (2009) Christopher A. Maher et al. NATURE
- Transcriptome-guided characterization of genomic rearrangements in a breast cancer cell line
- (2009) Qi Zhao et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Chimeric transcript discovery by paired-end transcriptome sequencing
- (2009) C. A. Maher et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis
- (2008) Ryan Lister et al. CELL
- Accurate whole human genome sequencing using reversible terminator chemistry
- (2008) David R. Bentley et al. NATURE
- A large genome center's improvements to the Illumina sequencing system
- (2008) Michael A Quail et al. NATURE METHODS
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
- (2008) U. Nagalakshmi et al. SCIENCE
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