Semi‐quantitative characterisation of mixed pollen samples using MinION sequencing and Reverse Metagenomics (RevMet)

Minimap2: pairwise alignment for nucleotide sequences

(2018) Heng Li   BIOINFORMATICS

Generalisation and specialisation in hoverfly (Syrphidae) grassland pollen transport networks revealed by DNA metabarcoding

(2018) Andrew Lucas et al.   JOURNAL OF ANIMAL ECOLOGY

Quantitative and qualitative assessment of pollen DNA metabarcoding using constructed species mixtures

(2018) Karen L. Bell et al.   MOLECULAR ECOLOGY

A diet rich in C3 plants reveals the sensitivity of an alpine mammal to climate change

(2018) Sabuj Bhattacharyya et al.   MOLECULAR ECOLOGY

How quantitative is metabarcoding: A meta‐analytical approach

(2018) Philip D. Lamb et al.   MOLECULAR ECOLOGY

Assembly processes of trophic guilds in the root mycobiome of temperate forests

(2018) Kristina Schröter et al.   MOLECULAR ECOLOGY

A world of opportunities with nanopore sequencing

(2017) Richard M Leggett et al.   JOURNAL OF EXPERIMENTAL BOTANY

Shotgun metagenomics, from sampling to analysis

(2017) Christopher Quince et al.   NATURE BIOTECHNOLOGY

Applying Pollen DNA Metabarcoding to the Study of Plant–Pollinator Interactions

(2017) Karen L. Bell et al.   Applications in Plant Sciences

Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.

(2017) Sebastian Beier et al.   Scientific Data

Toward Accurate and Quantitative Comparative Metagenomics

(2016) Stephen Nayfach et al.   CELL

Safeguarding pollinators and their values to human well-being

(2016) Simon G. Potts et al.   NATURE

Telling plant species apart with DNA: from barcodes to genomes

(2016) Peter M. Hollingsworth et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Non-cultivated plants present a season-long route of pesticide exposure for honey bees

(2016) Elizabeth Y. Long et al.   Nature Communications

Life-Long Radar Tracking of Bumblebees

(2016) Joseph L. Woodgate et al.   PLoS One

Using metabarcoding to reveal and quantify plant-pollinator interactions

(2016) André Pornon et al.   Scientific Reports

Pollinator-friendly management does not increase the diversity of farmland bees and wasps

(2015) Thomas J. Wood et al.   BIOLOGICAL CONSERVATION

How much flower-rich habitat is enough for wild pollinators? Answering a key policy question with incomplete knowledge

(2015) LYNN V. DICKS et al.   ECOLOGICAL ENTOMOLOGY

Library preparation methodology can influence genomic and functional predictions in human microbiome research

(2015) Marcus B. Jones et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DNA barcodes for ecology, evolution, and conservation

(2015) W. John Kress et al.   TRENDS IN ECOLOGY & EVOLUTION

Application of ITS2 Metabarcoding to Determine the Provenance of Pollen Collected by Honey Bees in an Agroecosystem

(2015) Rodney T. Richardson et al.   Applications in Plant Sciences

Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach

(2015) Wiebke Sickel et al.   BMC ECOLOGY

The Road to Metagenomics: From Microbiology to DNA Sequencing Technologies and Bioinformatics

(2015) Alejandra Escobar-Zepeda et al.   Frontiers in Genetics

Plant DNA barcoding: from gene to genome

(2014) Xiwen Li et al.   BIOLOGICAL REVIEWS

The potential for indirect effects between co-flowering plants via shared pollinators depends on resource abundance, accessibility and relatedness

(2014) Luísa Gigante Carvalheiro et al.   ECOLOGY LETTERS

Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing

(2014) Ken Kraaijeveld et al.   Molecular Ecology Resources

Evaluating multiplexed next-generation sequencing as a method in palynology for mixed pollen samples

(2014) A. Keller et al.   PLANT BIOLOGY

Ecological intensification of agriculture—sustainable by nature

(2014) Pablo Tittonell   Current Opinion in Environmental Sustainability

An introduction to the analysis of shotgun metagenomic data

(2014) Thomas J. Sharpton   Frontiers in Plant Science

NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries

(2013) Richard M. Leggett et al.   BIOINFORMATICS

Hedgerow restoration promotes pollinator populations and exports native bees to adjacent fields

(2013) Lora A. Morandin et al.   ECOLOGICAL APPLICATIONS

Threats to an ecosystem service: pressures on pollinators

(2013) Adam J Vanbergen et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

Plant-Pollinator Interactions over 120 Years: Loss of Species, Co-Occurrence, and Function

(2013) L. A. Burkle et al.   SCIENCE

Ultra-deep sequencing enables high-fidelity recovery of biodiversity for bulk arthropod samples without PCR amplification

(2013) Xin Zhou et al.   GigaScience

Pollen morphology of Campanula (Campanulaceae) and allied genera in Iran with special focus on its systematic implication

(2012) Elmira Khansari et al.   FLORA

Identifying key knowledge needs for evidence-based conservation of wild insect pollinators: a collaborative cross-sectoral exercise

(2012) Lynn V. Dicks et al.   Insect Conservation and Diversity

Ecological intensification: harnessing ecosystem services for food security

(2012) Riccardo Bommarco et al.   TRENDS IN ECOLOGY & EVOLUTION

Navigating the tip of the genomic iceberg: Next-generation sequencing for plant systematics

(2011) Shannon C. K. Straub et al.   AMERICAN JOURNAL OF BOTANY

How many flowering plants are pollinated by animals?

(2011) Jeff Ollerton et al.   OIKOS

Microbial Metagenomics: Beyond the Genome

(2010) Jack A. Gilbert et al.   Annual Review of Marine Science

Global pollinator declines: trends, impacts and drivers

(2010) Simon G. Potts et al.   TRENDS IN ECOLOGY & EVOLUTION

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Interspecific Pollen Transfer: Magnitude, Prevalence and Consequences for Plant Fitness

(2008) Carolina L. Morales et al.   CRITICAL REVIEWS IN PLANT SCIENCES