Spatiotemporal immune zonation of the human kidney

Spatial and Single-Cell Transcriptional Profiling Identifies Functionally Distinct Human Dermal Fibroblast Subpopulations

(2018) Christina Philippeos et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors

(2018) Laleh Haghverdi et al.   NATURE BIOTECHNOLOGY

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Single-cell transcriptomics of the mouse kidney reveals potential cellular targets of kidney disease

(2018) Jihwan Park et al.   SCIENCE

Single-cell analysis of progenitor cell dynamics and lineage specification in the human fetal kidney

(2018) Rajasree Menon et al.   DEVELOPMENT

Single-cell transcriptomes from human kidneys reveal the cellular identity of renal tumors

(2018) Matthew D. Young et al.   SCIENCE

Dissecting the Global Dynamic Molecular Profiles of Human Fetal Kidney Development by Single-Cell RNA Sequencing

(2018) Ping Wang et al.   Cell Reports

High-Dimensional Single-Cell Analysis Identifies Organ-Specific Signatures and Conserved NK Cell Subsets in Humans and Mice

(2018) Adeline Crinier et al.   IMMUNITY

Single-cell reconstruction of the early maternal–fetal interface in humans

(2018) Roser Vento-Tormo et al.   NATURE

Dimensionality reduction for visualizing single-cell data using UMAP

(2018) Etienne Becht et al.   NATURE BIOTECHNOLOGY

The transcriptional program, functional heterogeneity, and clinical targeting of mast cells

(2017) Gökhan Cildir et al.   JOURNAL OF EXPERIMENTAL MEDICINE

Urinary NGAL deficiency in recurrent urinary tract infections

(2017) Catherine S. Forster et al.   PEDIATRIC NEPHROLOGY

Mapping the human DC lineage through the integration of high-dimensional techniques

(2017) Peter See et al.   SCIENCE

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors

(2017) Alexandra-Chloé Villani et al.   SCIENCE

Transcriptional Regulation of Tissue-Resident Lymphocytes

(2017) Laura K. Mackay et al.   TRENDS IN IMMUNOLOGY

Massively parallel digital transcriptional profiling of single cells

(2017) Grace X. Y. Zheng et al.   Nature Communications

Cell-Type-Specific Gene Programs of the Normal Human Nephron Define Kidney Cancer Subtypes

(2017) David Lindgren et al.   Cell Reports

Origin of the hematopoietic system in the human embryo

(2016) Emmanuelle Julien et al.   FEBS LETTERS

Human dendritic cells (DCs) are derived from distinct circulating precursors that are precommitted to become CD1c + or CD141 + DCs

(2016) Gaëlle Breton et al.   JOURNAL OF EXPERIMENTAL MEDICINE

The heterogeneity of human CD127+ innate lymphoid cells revealed by single-cell RNA sequencing

(2016) Åsa K Björklund et al.   NATURE IMMUNOLOGY

Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes

(2016) L. K. Mackay et al.   SCIENCE

Specification of tissue-resident macrophages during organogenesis

(2016) E. Mass et al.   SCIENCE

Tenascin-C drives persistence of organ fibrosis

(2016) Swati Bhattacharyya et al.   Nature Communications

Innate immunity and genetic determinants of urinary tract infection susceptibility

(2015) Gabriela Godaly et al.   CURRENT OPINION IN INFECTIOUS DISEASES

The Kidney Transcriptome and Proteome Defined by Transcriptomics and Antibody-Based Profiling

(2015) Masato Habuka et al.   PLoS One

Flagellin/TLR5 signalling activates renal collecting duct cells and facilitates invasion and cellular translocation of uropathogenicEscherichia coli

(2014) Marcelle Bens et al.   CELLULAR MICROBIOLOGY

Human Dermal CD14 + Cells Are a Transient Population of Monocyte-Derived Macrophages

(2014) Naomi McGovern et al.   IMMUNITY

Claudins and the Kidney

(2014) A. S. L. Yu   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Constant replenishment from circulating monocytes maintains the macrophage pool in the intestine of adult mice

(2014) Calum C Bain et al.   NATURE IMMUNOLOGY

Intravascular staining for discrimination of vascular and tissue leukocytes

(2014) Kristin G Anderson et al.   Nature Protocols

Glomerular development – Shaping the multi-cellular filtration unit

(2014) C. Schell et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Induction and patterning of the metanephric nephron

(2014) Lori L. O’Brien et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

HNF1B controls proximal-intermediate nephron segment identity in vertebrates by regulating Notch signalling components and Irx1/2

(2013) C. Heliot et al.   DEVELOPMENT

A smart local moving algorithm for large-scale modularity-based community detection

(2013) Ludo Waltman et al.   EUROPEAN PHYSICAL JOURNAL B

Human dendritic cell subsets

(2013) Matthew Collin et al.   IMMUNOLOGY

Uropathogenic Escherichia coli Induces Serum Amyloid A in Mice following Urinary Tract and Systemic Inoculation

(2012) Andreja Erman et al.   PLoS One

A Lineage of Myeloid Cells Independent of Myb and Hematopoietic Stem Cells

(2012) C. Schulz et al.   SCIENCE

Gene expression profiling reveals the defining features of the classical, intermediate, and nonclassical human monocyte subsets

(2011) K. L. Wong et al.   BLOOD

The GUDMAP database - an online resource for genitourinary research

(2011) S. D. Harding et al.   DEVELOPMENT

SOX9 controls epithelial branching by activating RET effector genes during kidney development

(2011) Antoine Reginensi et al.   HUMAN MOLECULAR GENETICS

Patterning a Complex Organ: Branching Morphogenesis and Nephron Segmentation in Kidney Development

(2010) Frank Costantini et al.   DEVELOPMENTAL CELL

Fate Mapping Analysis Reveals That Adult Microglia Derive from Primitive Macrophages

(2010) F. Ginhoux et al.   SCIENCE

Kidney development: from ureteric bud formation to branching morphogenesis

(2009) Odyssé Michos   CURRENT OPINION IN GENETICS & DEVELOPMENT

A murine model of urinary tract infection

(2009) Chia-Suei Hung et al.   Nature Protocols

Expression of Stem Cell Markers in the Human Fetal Kidney

(2009) Sally Metsuyanim et al.   PLoS One

Atlas of Gene Expression in the Developing Kidney at Microanatomic Resolution

(2008) Eric W. Brunskill et al.   DEVELOPMENTAL CELL

Developmental biology of the human kidney

(2007) Norman D. Rosenblum   Seminars in Fetal & Neonatal Medicine