Museum specimens provide reliable SNP data for population genomic analysis of a widely distributed but threatened cockatoo species
出版年份 2019 全文链接
标题
Museum specimens provide reliable SNP data for population genomic analysis of a widely distributed but threatened cockatoo species
作者
关键词
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出版物
Molecular Ecology Resources
Volume -, Issue -, Pages -
出版商
Wiley
发表日期
2019-09-05
DOI
10.1111/1755-0998.13082
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- (2019) Ke Bi et al. PLoS Genetics
- Genome Sequencing of Museum Specimens Reveals Rapid Changes in the Genetic Composition of Honey Bees in California
- (2018) Julie M Cridland et al. Genome Biology and Evolution
- Performance of commonly requested destructive museum samples for mammalian genomic studies
- (2018) Molly M McDonough et al. JOURNAL OF MAMMALOGY
- Performance and precision of double digestion RAD (ddRAD) genotyping in large multiplexed datasets of marine fish species
- (2018) F. Maroso et al. Marine Genomics
- These aren't the loci you're looking for: Principles of effective SNP filtering for molecular ecologists
- (2018) Shannon J. O'Leary et al. MOLECULAR ECOLOGY
- Recovering the evolutionary history of crowned pigeons (Columbidae: Goura ): Implications for the biogeography and conservation of New Guinean lowland birds
- (2018) Jade Bruxaux et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Quantifying Temporal Genomic Erosion in Endangered Species
- (2018) David Díez-del-Molino et al. TRENDS IN ECOLOGY & EVOLUTION
- Fresh is best: Accurate SNP genotyping from koala scats
- (2018) Anthony J. Schultz et al. Ecology and Evolution
- Two speed invasion: assisted and intrinsic dispersal of common mynas over 150 years of colonization
- (2018) Kyle M. Ewart et al. JOURNAL OF BIOGEOGRAPHY
- Minimum sample sizes for population genomics: an empirical study from an Amazonian plant species
- (2017) Alison G. Nazareno et al. Molecular Ecology Resources
- A new model for ancient DNA decay based on paleogenomic meta-analysis
- (2017) Logan Kistler et al. NUCLEIC ACIDS RESEARCH
- Analysis of Phylogenomic Tree Space Resolves Relationships Among Marsupial Families
- (2017) David A Duchêne et al. SYSTEMATIC BIOLOGY
- Call for a Paradigm Shift in the Genetic Management of Fragmented Populations
- (2017) Katherine Ralls et al. Conservation Letters
- Identifying hybridization and admixture using SNPs: application of the DArTseq platform in phylogeographic research on vertebrates
- (2017) Jane Melville et al. Royal Society Open Science
- Population genomic data delineate conservation units in mottled ducks ( Anas fulvigula )
- (2016) Jeffrey L. Peters et al. BIOLOGICAL CONSERVATION
- Characterizing restriction enzyme-associated loci in historic ragweed (Ambrosia artemisiifolia) voucher specimens using custom-designed RNA probes
- (2016) Fátima Sánchez Barreiro et al. Molecular Ecology Resources
- Population structure of Atlantic mackerel inferred from RAD-seq-derived SNP markers: effects of sequence clustering parameters and hierarchical SNP selection
- (2016) Naiara Rodríguez-Ezpeleta et al. Molecular Ecology Resources
- Resources for phylogenomic analyses of Australian terrestrial vertebrates
- (2016) Jason G. Bragg et al. Molecular Ecology Resources
- RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data
- (2016) Sandra L. Hoffberg et al. Molecular Ecology Resources
- Harnessing the power of RADseq for ecological and evolutionary genomics
- (2016) Kimberly R. Andrews et al. NATURE REVIEWS GENETICS
- Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics
- (2016) Michael G. Harvey et al. SYSTEMATIC BIOLOGY
- Bioinformatic processing of RAD-seq data dramatically impacts downstream population genetic inference
- (2016) Aaron B. A. Shafer et al. Methods in Ecology and Evolution
- Cunningham's skinks show low genetic connectivity and signatures of divergent selection across its distribution
- (2016) Benjamin Y. Ofori et al. Ecology and Evolution
- Hybridization Capture Using RAD Probes (hyRAD), a New Tool for Performing Genomic Analyses on Collection Specimens
- (2016) Tomasz Suchan et al. PLoS One
- RAD Capture (Rapture): Flexible and Efficient Sequence-Based Genotyping
- (2015) O. A. Ali et al. GENETICS
- The use of museum specimens with high-throughput DNA sequencers
- (2015) Andrew S. Burrell et al. JOURNAL OF HUMAN EVOLUTION
- Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADSeq)
- (2015) Carly F. Graham et al. Molecular Ecology Resources
- An Analysis of Factors Affecting Genotyping Success from Museum Specimens Reveals an Increase of Genetic and Morphological Variation during a Historical Range Expansion of a European Spider
- (2015) Henrik Krehenwinkel et al. PLoS One
- The future of ancient DNA: Technical advances and conceptual shifts
- (2014) Michael Hofreiter et al. BIOESSAYS
- Restriction site-associated DNA sequencing, genotyping error estimation andde novoassembly optimization for population genetic inference
- (2014) A. Mastretta-Yanes et al. Molecular Ecology Resources
- Sequencing pools of individuals — mining genome-wide polymorphism data without big funding
- (2014) Christian Schlötterer et al. NATURE REVIEWS GENETICS
- Confidence Intervals for Population Allele Frequencies: The General Case of Sampling from a Finite Diploid Population of Any Size
- (2014) Tak Fung et al. PLoS One
- Sequencing Degraded DNA from Non-Destructively Sampled Museum Specimens for RAD-Tagging and Low-Coverage Shotgun Phylogenetics
- (2014) Mandy Man-Ying Tin et al. PLoS One
- SNP ascertainment bias in population genetic analyses: Why it is important, and how to correct it
- (2013) Joseph Lachance et al. BIOESSAYS
- Estimating and interpreting FST: The impact of rare variants
- (2013) G. Bhatia et al. GENOME RESEARCH
- Unlocking the vault: next-generation museum population genomics
- (2013) Ke Bi et al. MOLECULAR ECOLOGY
- Genotyping-by-sequencing in ecological and conservation genomics
- (2013) Shawn R. Narum et al. MOLECULAR ECOLOGY
- Stacks: an analysis tool set for population genomics
- (2013) Julian Catchen et al. MOLECULAR ECOLOGY
- Nonconvergence in Bayesian estimation of migration rates
- (2013) Patrick G. Meirmans Molecular Ecology Resources
- Development of DArT Marker Platforms and Genetic Diversity Assessment of the U.S. Collection of the New Oilseed Crop Lesquerella and Related Species
- (2013) Von Mark V. Cruz et al. PLoS One
- GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update
- (2012) R. Peakall et al. BIOINFORMATICS
- The effect of RAD allele dropout on the estimation of genetic variation within and between populations
- (2012) Mathieu Gautier et al. MOLECULAR ECOLOGY
- Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach
- (2012) Jesse A. Poland et al. PLoS One
- Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species
- (2012) Brant K. Peterson et al. PLoS One
- Estimates of Genetic Differentiation Measured by FST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers
- (2012) Eva-Maria Willing et al. PLoS One
- Sampling for Microsatellite-Based Population Genetic Studies: 25 to 30 Individuals per Population Is Enough to Accurately Estimate Allele Frequencies
- (2012) Marie L. Hale et al. PLoS One
- Museum collections in ornithology: today's record of avian biodiversity for tomorrow's world
- (2011) Leo Joseph EMU
- Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges
- (2011) S. J. HELYAR et al. Molecular Ecology Resources
- Museum genomics: low-cost and high-accuracy genetic data from historical specimens
- (2011) KEVIN C. ROWE et al. Molecular Ecology Resources
- Genome-wide genetic marker discovery and genotyping using next-generation sequencing
- (2011) John W. Davey et al. NATURE REVIEWS GENETICS
- Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences
- (2011) Julian M. Catchen et al. G3-Genes Genomes Genetics
- Genomics and the future of conservation genetics
- (2010) Fred W. Allendorf et al. NATURE REVIEWS GENETICS
- genhet: an easy-to-use R function to estimate individual heterozygosity
- (2009) A. COULON Molecular Ecology Resources
- What sampling is needed for reliable estimations of genetic diversity in Fraxinus excelsior L. (Oleaceae)?
- (2008) Naoko Miyamoto et al. ANNALS OF FOREST SCIENCE
- adegenet: a R package for the multivariate analysis of genetic markers
- (2008) Thibaut Jombart BIOINFORMATICS
- DNA damage in preserved specimens and tissue samples: a molecular assessment
- (2008) Juergen Zimmermann et al. Frontiers in Zoology
- Genes mirror geography within Europe
- (2008) John Novembre et al. NATURE
- Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers
- (2008) Nathan A. Baird et al. PLoS One
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