Earlier demethylation of myogenic genes contributes to embryonic precocious terminal differentiation of myoblasts in miniature pigs

Analysis of DNA methylation in cancer: location revisited

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The DNA methylation profile of oocytes in mice with hyperinsulinaemia and hyperandrogenism as detected by single-cell level whole genome bisulphite sequencing (SC-WGBS) technology

(2018) Qian-Nan Li et al.   REPRODUCTION FERTILITY AND DEVELOPMENT

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(2018) Yitzhak Reizel et al.   Nature Communications

Direct Reprogramming of Mouse Fibroblasts into Functional Skeletal Muscle Progenitors

(2018) Ori Bar-Nur et al.   Stem Cell Reports

Myomaker and Myomerger Work Independently to Control Distinct Steps of Membrane Remodeling during Myoblast Fusion

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Comparative analysis of DNA methylome and transcriptome of skeletal muscle in lean-, obese- and mini-type pigs

(2017) Yalan Yang et al.   Scientific Reports

Ten-Eleven Translocation-2 (Tet2) Is Involved in Myogenic Differentiation of Skeletal Myoblast Cells in Vitro

(2017) Xia Zhong et al.   Scientific Reports

iTRAQ-based quantitative proteomic analysis reveals the distinct early embryo myofiber type characteristics involved in landrace and miniature pig

(2016) Xumeng Zhang et al.   BMC GENOMICS

Role of TET enzymes in DNA methylation, development, and cancer

(2016) Kasper Dindler Rasmussen et al.   GENES & DEVELOPMENT

Copy number variation identification and analysis of the chicken genome using a 60K SNP BeadChip

(2016) Y. S. Rao et al.   POULTRY SCIENCE

Combined analysis of DNA methylome and transcriptome reveal novel candidate genes with susceptibility to bovine Staphylococcus aureus subclinical mastitis

(2016) Minyan Song et al.   Scientific Reports

Profiling the genome-wide DNA methylation pattern of porcine ovaries using reduced representation bisulfite sequencing

(2016) Xiao-Long Yuan et al.   Scientific Reports

Dynamic transcriptome profiles of skeletal muscle tissue across 11 developmental stages for both Tongcheng and Yorkshire pigs

(2015) Yuqiang Zhao et al.   BMC GENOMICS

Myomaker, Regulated by MYOD, MYOG and miR-140-3p, Promotes Chicken Myoblast Fusion

(2015) Wen Luo et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

DNA Methylation Landscapes of Human Fetal Development

(2015) Roderick C. Slieker et al.   PLoS Genetics

Breed-specific expression of GR exon 1 mRNA variants and profile of GR promoter CpG methylation in the hippocampus of newborn piglets

(2014) Q. Sun et al.   Animal

Sperm DNA Methylation Analysis in Swine Reveals Conserved and Species-Specific Methylation Patterns and Highlights an Altered Methylation at the GNAS Locus in Infertile Boars1

(2014) Annabelle Congras et al.   BIOLOGY OF REPRODUCTION

DNA methylation dynamics of the human preimplantation embryo

(2014) Zachary D. Smith et al.   NATURE

Incorporation of histone H3.1 suppresses the lineage potential of skeletal muscle

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Active DNA demethylation of the vertebrate genomes by DNA methyltransferases: deaminase, dehydroxymethylase or demethylase?

(2014) Keh-Yang Wang et al.   Epigenomics

Genome-wide DNA Methylation Profiles and Their Relationships with mRNA and the microRNA Transcriptome in Bovine Muscle Tissue (Bos taurine)

(2014) Yong-Zhen Huang et al.   Scientific Reports

DNA methylation and methylcytosine oxidation in cell fate decisions

(2013) Kian Peng Koh et al.   CURRENT OPINION IN CELL BIOLOGY

Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population

(2013) R. J. Schmitz et al.   GENOME RESEARCH

Identification and systematic annotation of tissue-specific differentially methylated regions using the Illumina 450k array

(2013) Roderick C Slieker et al.   Epigenetics & Chromatin

Analyses of pig genomes provide insight into porcine demography and evolution

(2012) Martien A. M. Groenen et al.   NATURE

Functions of DNA methylation: islands, start sites, gene bodies and beyond

(2012) Peter A. Jones   NATURE REVIEWS GENETICS

Reprogramming DNA methylation in the mammalian life cycle: building and breaking epigenetic barriers

(2012) S. Seisenberger et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Active DNA demethylation by Gadd45 and DNA repair

(2012) Christof Niehrs et al.   TRENDS IN CELL BIOLOGY

DNA demethylation by TDG

(2012) Shannon R Dalton et al.   Epigenomics

An atlas of DNA methylomes in porcine adipose and muscle tissues

(2012) Mingzhou Li et al.   Nature Communications

methylKit: a comprehensive R package for the analysis of genome-wide DNA methylation profiles

(2012) Altuna Akalin et al.   GENOME BIOLOGY

Changes of DNA Methylation Level and Spatial Arrangement of Primordial Germ Cells in Embryonic Day 15 to Embryonic Day 28 Pig Embryos1

(2011) Sara Maj Watjen Hyldig et al.   BIOLOGY OF REPRODUCTION

How selective sweeps in domestic animals provide new insight into biological mechanisms

(2011) L. Andersson   JOURNAL OF INTERNAL MEDICINE

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(2011) Cedric Ginestet   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES A-STATISTICS IN SOCIETY

Genome-wide Regulation of 5hmC, 5mC, and Gene Expression by Tet1 Hydroxylase in Mouse Embryonic Stem Cells

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Analysis of DNA Methylation in Various Swine Tissues

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Tet-Mediated Formation of 5-Carboxylcytosine and Its Excision by TDG in Mammalian DNA

(2011) Y.-F. He et al.   SCIENCE

Tet Proteins Can Convert 5-Methylcytosine to 5-Formylcytosine and 5-Carboxylcytosine

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Evaluation of the Infinium Methylation 450K technology

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Whole-genome DNA methylation profiling using MethylCap-seq

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Single base–resolution methylome of the silkworm reveals a sparse epigenomic map

(2010) Hui Xiang et al.   NATURE BIOTECHNOLOGY

Dnmt3a-Dependent Nonpromoter DNA Methylation Facilitates Transcription of Neurogenic Genes

(2010) H. Wu et al.   SCIENCE

Genome-scale DNA methylation analysis

(2010) Shaun D Fouse et al.   Epigenomics

The DNA Methylome of Human Peripheral Blood Mononuclear Cells

(2010) Yingrui Li et al.   PLOS BIOLOGY

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome

(2009) David Serre et al.   NUCLEIC ACIDS RESEARCH

Conversion of 5-Methylcytosine to 5-Hydroxymethylcytosine in Mammalian DNA by MLL Partner TET1

(2009) M. Tahiliani et al.   SCIENCE

Genome-scale DNA methylation maps of pluripotent and differentiated cells

(2008) Alexander Meissner et al.   NATURE

A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis

(2008) Thomas A Down et al.   NATURE BIOTECHNOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

The methylome: approaches for global DNA methylation profiling

(2008) Stephan Beck et al.   TRENDS IN GENETICS