Sucrose 6F-phosphate phosphorylase: a novel insight in the human gut microbiome

Exploring the sequence diversity in glycoside hydrolase family 13_18 reveals a novel glucosylglycerol phosphorylase

(2018) Jorick Franceus et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Genomic and functional analysis of Romboutsia ilealis CRIBT reveals adaptation to the small intestine

(2017) Jacoline Gerritsen et al.   PeerJ

Converting bulk sugars into prebiotics: semi-rational design of a transglucosylase with controlled selectivity

(2016) Tom Verhaeghe et al.   CHEMICAL COMMUNICATIONS

Synthesis of the rare disaccharide nigerose by structure-based design of a phosphorylase mutant with altered regioselectivity

(2016) M. Kraus et al.   CHEMICAL COMMUNICATIONS

Ruminococcus gnavusE1 modulates mucin expression and intestinal glycosylation

(2016) F. Graziani et al.   JOURNAL OF APPLIED MICROBIOLOGY

Distant Site Effects of Ingested Prebiotics

(2016) Stephanie Collins et al.   Nutrients

Impact of the gut microbiota on inflammation, obesity, and metabolic disease

(2016) Claire L. Boulangé et al.   Genome Medicine

Influence of high-fat diet on gut microbiota

(2015) E. Angela Murphy et al.   CURRENT OPINION IN CLINICAL NUTRITION AND METABOLIC CARE

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera

(2015) Zhihong Sun et al.   Nature Communications

The quest for a thermostable sucrose phosphorylase reveals sucrose 6′-phosphate phosphorylase as a novel specificity

(2014) Tom Verhaeghe et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Automatic prediction of polysaccharide utilization loci in Bacteroidetes species

(2014) Nicolas Terrapon et al.   BIOINFORMATICS

An integrated catalog of reference genes in the human gut microbiome

(2014) Junhua Li et al.   NATURE BIOTECHNOLOGY

Deciphering key features in protein structures with the new ENDscript server

(2014) Xavier Robert et al.   NUCLEIC ACIDS RESEARCH

α-Amylase: an enzyme specificity found in various families of glycoside hydrolases

(2013) Štefan Janeček et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Functional characterization of sucrose phosphorylase and scrR, a regulator of sucrose metabolism in Lactobacillus reuteri

(2013) Januana S. Teixeira et al.   FOOD MICROBIOLOGY

Ionic liquids as cosolvents for glycosylation by sucrose phosphorylase: balancing acceptor solubility and enzyme stability

(2013) Karel De Winter et al.   GREEN CHEMISTRY

High-fat diet alters gut microbiota physiology in mice

(2013) Hannelore Daniel et al.   ISME Journal

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

Utilisation of Mucin Glycans by the Human Gut Symbiont Ruminococcus gnavus Is Strain-Dependent

(2013) Emmanuelle H. Crost et al.   PLoS One

Multifunctional fructans and raffinose family oligosaccharides

(2013) Wim Van den Ende   Frontiers in Plant Science

Functional Analysis of Family GH36 α-Galactosidases from Ruminococcus gnavus E1: Insights into the Metabolism of a Plant Oligosaccharide by a Human Gut Symbiont

(2012) M. Cervera-Tison et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Adding unaligned sequences into an existing alignment using MAFFT and LAST

(2012) Kazutaka Katoh et al.   BIOINFORMATICS

Ruminococcin C, a new anti-Clostridium perfringens bacteriocin produced in the gut by the commensal bacterium Ruminococcus gnavus E1

(2011) E.H. Crost et al.   BIOCHIMIE

Transglucosylation potential of six sucrose phosphorylases toward different classes of acceptors

(2011) Dirk Aerts et al.   CARBOHYDRATE RESEARCH

Characterization and distribution of the gene cluster encoding RumC, an anti-Clostridium perfringens bacteriocin produced in the gut

(2011) Ange Pujol et al.   FEMS MICROBIOLOGY ECOLOGY

α-Galactosidase/Sucrose Kinase (AgaSK), a Novel Bifunctional Enzyme from the Human Microbiome Coupling Galactosidase and Kinase Activities

(2011) Laëtitia Bruel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A randomised double-blind placebo-controlled trial with Lactobacillus acidophilus La-5 and Bifidobacterium animalis subsp. lactis BB-12 for maintenance of remission in ulcerative colitis

(2011) Signe Wildt et al.   Journal of Crohns & Colitis

GH10 xylanase D from Penicillium funiculosum: biochemical studies and xylooligosaccharide production

(2011) Mickael Lafond et al.   Microbial Cell Factories

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Aga1, the first alpha-Galactosidase from the human bacteria Ruminococcus gnavus E1, efficiently transcribed in gut conditions

(2011) Margarita Aguilera et al.   RESEARCH IN MICROBIOLOGY

Predicting a Human Gut Microbiota's Response to Diet in Gnotobiotic Mice

(2011) J. J. Faith et al.   SCIENCE

Germ-free C57BL/6J mice are resistant to high-fat-diet-induced insulin resistance and have altered cholesterol metabolism

(2010) Sylvie Rabot et al.   FASEB JOURNAL

Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes

(2010) L. Tasse et al.   GENOME RESEARCH

Complete Genome Sequence of Bifidobacterium longum subsp. longum BBMN68, a New Strain from a Healthy Chinese Centenarian

(2010) Y. Hao et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of Lactobacillus crispatus ST1

(2010) T. Ojala et al.   JOURNAL OF BACTERIOLOGY

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Gut Microbiota in Health and Disease

(2010) Inna Sekirov et al.   PHYSIOLOGICAL REVIEWS

Sucrose Phosphorylase Harbouring a Redesigned, Glycosyltransferase-Like Active Site Exhibits Retaining Glucosyl Transfer in the Absence of a Covalent Intermediate

(2009) Christiane Goedl et al.   CHEMBIOCHEM

Mechanistic differences among retaining disaccharide phosphorylases: insights from kinetic analysis of active site mutants of sucrose phosphorylase and α,α-trehalose phosphorylase

(2008) Christiane Goedl et al.   CARBOHYDRATE RESEARCH