标题
Quantifying and Understanding Well-to-Well Contamination in Microbiome Research
作者
关键词
-
出版物
mSystems
Volume 4, Issue 4, Pages -
出版商
American Society for Microbiology
发表日期
2019-06-24
DOI
10.1128/msystems.00186-19
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Best practices for analysing microbiomes
- (2018) Rob Knight et al. NATURE REVIEWS MICROBIOLOGY
- The microbiome in cancer immunotherapy: Diagnostic tools and therapeutic strategies
- (2018) Laurence Zitvogel et al. SCIENCE
- Recognizing the reagent microbiome
- (2018) Marcus C. de Goffau et al. Nature Microbiology
- Translating Lung Microbiome Profiles into the Next-Generation Diagnostic Gold Standard for Pneumonia: a Clinical Investigator’s Perspective
- (2018) Georgios D. Kitsios mSystems
- American Gut: an Open Platform for Citizen Science Microbiome Research
- (2018) Daniel McDonald et al. mSystems
- KatharoSeq Enables High-Throughput Microbiome Analysis from Low-Biomass Samples
- (2018) Jeremiah J. Minich et al. mSystems
- The Madness of Microbiome: Attempting To Find Consensus “Best Practice” for 16S Microbiome Studies
- (2018) Jolinda Pollock et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Regional variation limits applications of healthy gut microbiome reference ranges and disease models
- (2018) Yan He et al. NATURE MEDICINE
- Qiita: rapid, web-enabled microbiome meta-analysis
- (2018) Antonio Gonzalez et al. NATURE METHODS
- Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data
- (2018) Nicole M. Davis et al. Microbiome
- High-Throughput Miniaturized 16S rRNA Amplicon Library Preparation Reduces Costs while Preserving Microbiome Integrity
- (2018) Jeremiah J. Minich et al. mSystems
- Contamination in Low Microbial Biomass Microbiome Studies: Issues and Recommendations
- (2018) Raphael Eisenhofer et al. TRENDS IN MICROBIOLOGY
- A communal catalogue reveals Earth’s multiscale microbial diversity
- (2017) Luke R. Thompson et al. NATURE
- Assessment of variation in microbial community amplicon sequencing by the Microbiome Quality Control (MBQC) project consortium
- (2017) Rashmi Sinha et al. NATURE BIOTECHNOLOGY
- Balance Trees Reveal Microbial Niche Differentiation
- (2017) James T. Morton et al. mSystems
- Deblur Rapidly Resolves Single-Nucleotide Community Sequence Patterns
- (2017) Amnon Amir et al. mSystems
- Population-level analysis of gut microbiome variation
- (2016) Gwen Falony et al. SCIENCE
- From Sample to Multi-Omics Conclusions in under 48 Hours
- (2016) Robert A. Quinn et al. mSystems
- Preservation Methods Differ in Fecal Microbiome Stability, Affecting Suitability for Field Studies
- (2016) Se Jin Song et al. mSystems
- Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton
- (2015) A Apprill et al. AQUATIC MICROBIAL ECOLOGY
- The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies
- (2015) J Paul Brooks et al. BMC MICROBIOLOGY
- Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
- (2015) Alma E. Parada et al. ENVIRONMENTAL MICROBIOLOGY
- Microbiota of the indoor environment: a meta-analysis
- (2015) Rachel I. Adams et al. Microbiome
- Deriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data
- (2015) Jake Jervis-Bardy et al. Microbiome
- Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys
- (2015) William Walters et al. mSystems
- Strategies for Achieving High Sequencing Accuracy for Low Diversity Samples and Avoiding Sample Bleeding Using Illumina Platform
- (2015) Abhishek Mitra et al. PLoS One
- Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
- (2014) Susannah J Salter et al. BMC BIOLOGY
- SASI-Seq: sample assurance Spike-Ins, and highly differentiating 384 barcoding for Illumina sequencing
- (2014) Michael A Quail et al. BMC GENOMICS
- Improved Multiple Displacement Amplification (iMDA) and Ultraclean Reagents
- (2014) S Motley et al. BMC GENOMICS
- Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
- (2012) J Gregory Caporaso et al. ISME Journal
- Enterotypes of the human gut microbiome
- (2011) Manimozhiyan Arumugam et al. NATURE
- Bayesian community-wide culture-independent microbial source tracking
- (2011) Dan Knights et al. NATURE METHODS
- Contamination of Commercial PCR Master Mix with DNA fromCoxiella burnetii
- (2010) Jeroen J. H. C. Tilburg et al. JOURNAL OF CLINICAL MICROBIOLOGY
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
- (2010) J. G. Caporaso et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes
- (2009) Linda A. Amaral-Zettler et al. PLoS One
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now