Host-dependent nitrogen recycling as a mechanism of symbiont control in Aiptasia

Coral bleaching from a single cell perspective

(2018) Daniel Aagren Nielsen et al.   ISME Journal

Climate change promotes parasitism in a coral symbiosis

(2018) David M. Baker et al.   ISME Journal

Metabolic co-dependence drives the evolutionarily ancient Hydra–Chlorella symbiosis

(2018) Mayuko Hamada et al.   eLife

Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts

(2018) Todd C. LaJeunesse et al.   CURRENT BIOLOGY

DNA methylation regulates transcriptional homeostasis of algal endosymbiosis in the coral model Aiptasia

(2018) Yong Li et al.   Science Advances

Differential analysis of RNA-seq incorporating quantification uncertainty

(2017) Harold Pimentel et al.   NATURE METHODS

Meta-analysis of transcriptomic datasets identifies genes enriched in the mammalian circadian pacemaker

(2017) Laurence A. Brown et al.   NUCLEIC ACIDS RESEARCH

MIA: non-targeted mass isotopolome analysis

(2016) Daniel Weindl et al.   BIOINFORMATICS

Symbiosis induces widespread changes in the proteome of the model cnidarian Aiptasia

(2016) Clinton A. Oakley et al.   CELLULAR MICROBIOLOGY

Near-optimal probabilistic RNA-seq quantification

(2016) Nicolas L Bray et al.   NATURE BIOTECHNOLOGY

Meta-analysis and meta-regression of transcriptomic responses to water stress in Arabidopsis

(2016) Joshua S. Rest et al.   PLANT JOURNAL

GOplot: an R package for visually combining expression data with functional analysis: Fig. 1.

(2015) Wencke Walter et al.   BIOINFORMATICS

MetaboAnalyst 3.0—making metabolomics more meaningful

(2015) Jianguo Xia et al.   NUCLEIC ACIDS RESEARCH

The genome ofAiptasia, a sea anemone model for coral symbiosis

(2015) Sebastian Baumgarten et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Random-effects meta-analysis: the number of studies matters

(2015) Annamaria Guolo et al.   STATISTICAL METHODS IN MEDICAL RESEARCH

Morphological revision of the genus Aiptasia and the family Aiptasiidae (Cnidaria, Actiniaria, Metridioidea)

(2014) ALEJANDRO GRAJALES et al.   ZOOTAXA

Nitrogen Assimilation in Escherichia coli: Putting Molecular Data into a Systems Perspective

(2013) W. C. van Heeswijk et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

A journey into the wild of the cnidarian model systemAiptasiaand its symbionts

(2013) Christian R. Voolstra   MOLECULAR ECOLOGY

Highly Dynamic Cellular-Level Response of Symbiotic Coral to a Sudden Increase in Environmental Nitrogen

(2013) C. Kopp et al.   mBio

Extensive Differences in Gene Expression Between Symbiotic and Aposymbiotic Cnidarians

(2013) Erik M. Lehnert et al.   G3-Genes Genomes Genetics

A single-cell view of ammonium assimilation in coral–dinoflagellate symbiosis

(2012) Mathieu Pernice et al.   ISME Journal

Evidence that glucose is the major transferred metabolite in dinoflagellate-cnidarian symbiosis

(2012) M. S. Burriesci et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Cell Biology of Cnidarian-Dinoflagellate Symbiosis

(2012) S. K. Davy et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Nitrogen uptake, assimilation and remobilization in plants: challenges for sustainable and productive agriculture

(2010) Céline Masclaux-Daubresse et al.   ANNALS OF BOTANY

Tackling the widespread and critical impact of batch effects in high-throughput data

(2010) Jeffrey T. Leek et al.   NATURE REVIEWS GENETICS