Open collaborative writing with Manubot

Opportunities and obstacles for deep learning in biology and medicine

(2018) Travers Ching et al.   Journal of the Royal Society Interface

Ten simple rules for collaboratively writing a multi-authored paper

(2018) Marieke A. Frassl et al.   PLoS Computational Biology

Reproducibility of computational workflows is automated using continuous analysis

(2017) Brett K Beaulieu-Jones et al.   NATURE BIOTECHNOLOGY

Enhancing reproducibility for computational methods

(2016) V. Stodden et al.   SCIENCE

Ten Simple Rules for Taking Advantage of Git and GitHub

(2016) Yasset Perez-Riverol et al.   PLoS Computational Biology

A Quick Introduction to Version Control with Git and GitHub

(2016) John D. Blischak et al.   PLoS Computational Biology

Crowdsourcing in biomedicine: challenges and opportunities

(2015) Ritu Khare et al.   BRIEFINGS IN BIOINFORMATICS

Reviewing post-publication peer review

(2015) Paul Knoepfler   TRENDS IN GENETICS

Ten Simple Rules for Writing a Literature Review

(2013) Marco Pautasso   PLoS Computational Biology

A Systematic Review of Research on the Meaning, Ethics and Practices of Authorship across Scholarly Disciplines

(2011) Ana Marušić et al.   PLoS One

This revolution will be digitized: online tools for radical collaboration

(2009) C. Patil et al.   Disease Models & Mechanisms